############# Start of Description of junction: j61 # Number of strands: NUM_STRANDS = 6 LILLEY = HS2HS2HS2HS10HS10HS3 FINGERPRINT = 5:29:31:35:36:59:110:139:140:145:153:155:157:168:172 LOOP_LENGTH_SUM = 29 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2275 S1_NAME_ID3 = 2281 S1_NUM_ID5_ORIG = 2275 S1_NUM_ID3_ORIG = 2281 S1_NAME2_ID5 = 2276 S1_NAME2_ID3 = 2280 S1_NUM2_ID5_ORIG = 2276 S1_NUM2_ID3_ORIG = 2280 S1_SQ2 = UUUGA S1_SQLEN2 = 5 S1_SQ = GUUUGAC S1_SQLEN = 7 S1_CHAR = 3 ## Properties of strand 2 S2_NAME_ID5 = 2114 S2_NAME_ID3 = 2119 S2_NUM_ID5_ORIG = 2114 S2_NUM_ID3_ORIG = 2119 S2_NAME2_ID5 = 2115 S2_NAME2_ID3 = 2118 S2_NUM2_ID5_ORIG = 2115 S2_NUM2_ID3_ORIG = 2118 S2_SQ2 = UUUA S2_SQLEN2 = 4 S2_SQ = CUUUAC S2_SQLEN = 6 S2_CHAR = 3 ## Properties of strand 3 S3_NAME_ID5 = 2289 S3_NAME_ID3 = 2294 S3_NUM_ID5_ORIG = 2289 S3_NUM_ID3_ORIG = 2294 S3_NAME2_ID5 = 2290 S3_NAME2_ID3 = 2293 S3_NUM2_ID5_ORIG = 2290 S3_NUM2_ID3_ORIG = 2293 S3_SQ2 = UACG S3_SQLEN2 = 4 S3_SQ = GUACGC S3_SQLEN = 6 S3_CHAR = 3 ## Properties of strand 4 S4_NAME_ID5 = 2314 S4_NAME_ID3 = 2319 S4_NUM_ID5_ORIG = 2314 S4_NUM_ID3_ORIG = 2319 S4_NAME2_ID5 = 2315 S4_NAME2_ID3 = 2318 S4_NUM2_ID5_ORIG = 2315 S4_NUM2_ID3_ORIG = 2318 S4_SQ2 = CGCC S4_SQLEN2 = 4 S4_SQ = GCGCCC S4_SQLEN = 6 S4_CHAR = 3 ## Properties of strand 5 S5_NAME_ID5 = 2420 S5_NAME_ID3 = 2433 S5_NUM_ID5_ORIG = 2420 S5_NUM_ID3_ORIG = 2433 S5_NAME2_ID5 = 2421 S5_NAME2_ID3 = 2432 S5_NUM2_ID5_ORIG = 2421 S5_NUM2_ID3_ORIG = 2432 S5_SQ2 = GUCUAGCGAACC S5_SQLEN2 = 12 S5_SQ = GGUCUAGCGAACCA S5_SQLEN = 14 S5_CHAR = 3 ## Properties of strand 6 S6_NAME_ID5 = 2458 S6_NAME_ID3 = 2471 S6_NUM_ID5_ORIG = 2458 S6_NUM_ID3_ORIG = 2471 S6_NAME2_ID5 = 2459 S6_NAME2_ID3 = 2470 S6_NUM2_ID5_ORIG = 2459 S6_NUM2_ID3_ORIG = 2470 S6_SQ2 = GAUGACAGAAAA S6_SQLEN2 = 12 S6_SQ = UGAUGACAGAAAAG S6_SQLEN = 14 S6_CHAR = 3 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2276 H1_OUTID2_ORIG = 2118 H1_INSEQ_CHAR = 3 H1_OUTSEQ_CHAR = 3 # Position: H1_P_X = 9.510324271872738 H1_P_Y = -28.25151756500822 H1_P_Z = 17.12874150994341 # Orientation: H1_DX_X = -0.5624365806933955 H1_DX_Y = -0.7341859529846495 H1_DX_Z = -0.3803105035861378 H1_DY_X = 0.7555867164865475 H1_DY_Y = -0.6431665933975879 H1_DY_Z = 0.12419922305079822 H1_DZ_X = -0.33578833596032 H1_DZ_Y = -0.2175033783125251 H1_DZ_Z = 0.916481573112975 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 2290 H2_OUTID2_ORIG = 2280 H2_INSEQ_CHAR = 3 H2_OUTSEQ_CHAR = 3 # Position: H2_P_X = 2.697278203781045 H2_P_Y = -29.503217802107855 H2_P_Z = -9.294781801795216 # Orientation: H2_DX_X = 0.36508526890282234 H2_DX_Y = -0.8285280584625738 H2_DX_Z = -0.42456330831855027 H2_DY_X = -0.775735658428228 H2_DY_Y = -0.018589428947279885 H2_DY_Z = -0.630784132151673 H2_DZ_X = 0.5147299628670154 H2_DZ_Y = 0.5596388920291844 H2_DZ_Z = -0.6495054856236919 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 2315 H3_OUTID2_ORIG = 2293 H3_INSEQ_CHAR = 3 H3_OUTSEQ_CHAR = 3 # Position: H3_P_X = -9.196784027133337 H3_P_Y = -44.102143727397525 H3_P_Z = -17.703326343573035 # Orientation: H3_DX_X = 0.29369483149375597 H3_DX_Y = -0.8320509762235773 H3_DX_Z = 0.47056829357623187 H3_DY_X = -0.9054767644341553 H3_DY_Y = -0.39992941248819136 H3_DY_Z = -0.14201511925388743 H3_DZ_X = 0.3063579197992201 H3_DZ_Y = -0.38437954939387 H3_DZ_Z = -0.8708600272053282 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 2421 H4_OUTID2_ORIG = 2318 H4_INSEQ_CHAR = 3 H4_OUTSEQ_CHAR = 3 # Position: H4_P_X = -19.583861943427603 H4_P_Y = -60.84401428868119 H4_P_Z = -0.5649716803909461 # Orientation: H4_DX_X = -0.9094043083559171 H4_DX_Y = 0.35811925841702674 H4_DX_Z = -0.21150508432311277 H4_DY_X = -0.2568445497374299 H4_DY_Y = -0.8835380090380909 H4_DY_Z = -0.3916522230949162 H4_DZ_X = -0.32713098479640834 H4_DZ_Y = -0.30184629090954473 H4_DZ_Z = 0.8954742516958727 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 2 H5_OUTID2 = 13 H5_INID2_ORIG = 2459 H5_OUTID2_ORIG = 2432 H5_INSEQ_CHAR = 3 H5_OUTSEQ_CHAR = 3 # Position: H5_P_X = -1.7185386469615933 H5_P_Y = -64.93053523042158 H5_P_Z = 11.4066505129685 # Orientation: H5_DX_X = 0.009532004471747513 H5_DX_Y = 0.6735756993640365 H5_DX_Z = 0.739056775976648 H5_DY_X = -0.9931755405250033 H5_DY_Y = 0.0922922572306959 H5_DY_Z = -0.07130557452354935 H5_DZ_X = -0.1162389203047769 H5_DZ_Y = -0.7333334279040571 H5_DZ_Z = 0.6698586395090178 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 14 H6_INID2 = 2 H6_OUTID2 = 13 H6_INID2_ORIG = 2115 H6_OUTID2_ORIG = 2470 H6_INSEQ_CHAR = 3 H6_OUTSEQ_CHAR = 3 # Position: H6_P_X = 13.584419205560987 H6_P_Y = -27.324882128380217 H6_P_Z = 6.385923856617465 # Orientation: H6_DX_X = -0.9378924921233498 H6_DX_Y = 0.2548217808235904 H6_DX_Z = -0.23542203218167046 H6_DY_X = 0.2176940043565665 H6_DY_Y = 0.9606452101464846 H6_DY_Z = 0.172540142256274 H6_DZ_X = 0.27012403389157136 H6_DZ_Y = 0.11057413911266423 H6_DZ_Z = -0.9564551040554061 ############# END of Description of junction: j61