############# Start of Description of junction: j8 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 32:38:41:41:61:64:64:76:92:102:102:103:118:125:131:133:135:141:142:156:166 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 3 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 3 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 3 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 3 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 3 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 3 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 3 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 3 H1_OUTSEQ_CHAR = 3 # Position: H1_P_X = 14.19538482323313 H1_P_Y = -47.20403031418497 H1_P_Z = -15.860616468154184 # Orientation: H1_DX_X = -0.7771112645078269 H1_DX_Y = -0.616827683818677 H1_DX_Z = -0.12498676349890481 H1_DY_X = 0.22424020738119665 H1_DY_Y = -0.4569268268635085 H1_DY_Z = 0.8607753506496838 H1_DZ_X = -0.5880598710749503 H1_DZ_Y = 0.6408911634336434 H1_DZ_Z = 0.49340055194941 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 3 H2_OUTSEQ_CHAR = 3 # Position: H2_P_X = 23.463998639793672 H2_P_Y = -65.88594226160905 H2_P_Z = -20.993144469102944 # Orientation: H2_DX_X = 0.23098826807693484 H2_DX_Y = 0.5751654014585199 H2_DX_Z = -0.7847478454738699 H2_DY_X = 0.9477430703748446 H2_DY_Y = 0.04941640416922155 H2_DY_Z = 0.31518421844288724 H2_DZ_X = 0.22006247423694347 H2_DZ_Y = -0.8165431892827542 H2_DZ_Z = -0.5336944139380364 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 3 H3_OUTSEQ_CHAR = 3 # Position: H3_P_X = 12.53001151649114 H3_P_Y = -43.59773624048149 H3_P_Z = -35.474999395395386 # Orientation: H3_DX_X = 0.6315469139844438 H3_DX_Y = 0.7449423576353595 H3_DX_Z = -0.21496366957557456 H3_DY_X = 0.003945094691427897 H3_DY_Y = -0.2803355685830837 H3_DY_Z = -0.9598939551924843 H3_DZ_X = -0.7753276285961945 H3_DZ_Y = 0.605370013122446 H3_DZ_Z = -0.17998393135924573 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 3 H4_OUTSEQ_CHAR = 3 # Position: H4_P_X = 27.538091962242365 H4_P_Y = -37.71276503913522 H4_P_Z = -47.31275200902024 # Orientation: H4_DX_X = 0.697301378295311 H4_DX_Y = -0.24688906988472326 H4_DX_Z = -0.6729164695554104 H4_DY_X = -0.69539795484134 H4_DY_Y = -0.0054326810747014065 H4_DY_Z = -0.7186043211523412 H4_DZ_X = 0.1737598118954331 H4_DZ_Y = 0.9690285202963835 H4_DZ_Z = -0.1754743702717434 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 3 H5_OUTSEQ_CHAR = 3 # Position: H5_P_X = 41.471929434738406 H5_P_Y = -55.236585370513296 H5_P_Z = -54.44895398889893 # Orientation: H5_DX_X = 0.8370992794540442 H5_DX_Y = 0.44813120594765365 H5_DX_Z = 0.3137566231865563 H5_DY_X = 0.4833314296648368 H5_DY_Y = -0.33721761470862077 H5_DY_Z = -0.8078830419240006 H5_DZ_X = -0.2562333417720595 H5_DZ_Y = 0.8279267495292828 H5_DZ_Z = -0.49888051873990236 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 3 H6_OUTSEQ_CHAR = 3 # Position: H6_P_X = 46.342053022995245 H6_P_Y = -72.83927548644398 H6_P_Z = -41.38585331941406 # Orientation: H6_DX_X = -0.9813941443940095 H6_DX_Y = -0.05861684809946155 H6_DX_Z = 0.1828376286983442 H6_DY_X = -0.08792771581514813 H6_DY_Y = -0.7093336230092007 H6_DY_Z = -0.6993672340481538 H6_DZ_X = 0.17068758051094335 H6_DZ_Y = -0.7024314033323975 H6_DZ_Z = 0.6909818184813545 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 3 H7_OUTSEQ_CHAR = 3 # Position: H7_P_X = 37.98164313520394 H7_P_Y = -54.58899146854061 H7_P_Z = -29.578910782325767 # Orientation: H7_DX_X = -0.6749795549658728 H7_DX_Y = 0.16640759570239538 H7_DX_Z = 0.7188262046354588 H7_DY_X = -0.2767458479598801 H7_DY_Y = -0.9602081280570118 H7_DY_Z = -0.0375777387587668 H7_DZ_X = 0.6839695431925605 H7_DZ_Y = -0.22429637292163562 H7_DZ_Z = 0.6941734661301595 ############# END of Description of junction: j8