#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS5
FINGERPRINT = 55
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  7
S1_NAME_ID3 = 14
S1_NUM_ID5_ORIG =  7
S1_NUM_ID3_ORIG = 14
S1_NAME2_ID5 =  9
S1_NAME2_ID3 = 12
S1_NUM2_ID5_ORIG =  9
S1_NUM2_ID3_ORIG = 12
S1_SQ2 = CGGA
S1_SQLEN2 = 4
S1_SQ = ACCGGAGU
S1_SQLEN = 8
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  53
S2_NAME_ID3 = 63
S2_NUM_ID5_ORIG =  53
S2_NUM_ID3_ORIG = 63
S2_NAME2_ID5 =  55
S2_NAME2_ID3 = 61
S2_NUM2_ID5_ORIG =  55
S2_NUM2_ID3_ORIG = 61
S2_SQ2 = AGAGAUG
S2_SQLEN2 = 7
S2_SQ = GCAGAGAUGGU
S2_SQLEN = 11
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 9
H1_OUTID2_ORIG = 61
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = 58.28014617966117
H1_P_Y = 55.05768130118702
H1_P_Z = 57.61430844430051
# Orientation:
H1_DX_X = 0.4697004971202361
H1_DX_Y = 0.8657921914382527
H1_DX_Z = -0.17258425261174892
H1_DY_X = -0.6485303255327253
H1_DY_Y = 0.4710269512492786
H1_DY_Z = 0.5979481817525922
H1_DZ_X = 0.5989907009874429
H1_DZ_Y = -0.16893043669321628
H1_DZ_Z = 0.7827340849159512
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 55
H2_OUTID2_ORIG = 12
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 59.31401095836881
H2_P_Y = 46.509415841114425
H2_P_Z = 35.333223591878586
# Orientation:
H2_DX_X = 0.21105936385139046
H2_DX_Y = 0.5579394401902746
H2_DX_Z = 0.8025942474319194
H2_DY_X = -0.1751499615166523
H2_DY_Y = -0.7862145286385385
H2_DY_Z = 0.5926121884828177
H2_DZ_X = 0.9616529706247263
H2_DZ_Y = -0.2656507030629527
H2_DZ_Z = -0.06821486678721556
#############  END of Description of junction: j1