############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 155 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 72 S1_NAME_ID3 = 79 S1_NUM_ID5_ORIG = 72 S1_NUM_ID3_ORIG = 79 S1_NAME2_ID5 = 74 S1_NAME2_ID3 = 77 S1_NUM2_ID5_ORIG = 74 S1_NUM2_ID3_ORIG = 77 S1_SQ2 = AAUG S1_SQLEN2 = 4 S1_SQ = CCAAUGAU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 103 S2_NAME_ID3 = 109 S2_NUM_ID5_ORIG = 103 S2_NUM_ID3_ORIG = 109 S2_NAME2_ID5 = 105 S2_NAME2_ID3 = 107 S2_NUM2_ID5_ORIG = 105 S2_NUM2_ID3_ORIG = 107 S2_SQ2 = GUC S2_SQLEN2 = 3 S2_SQ = AAGUCGG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 74 H1_OUTID2_ORIG = 107 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -838.495570493577 H1_P_Y = -68.08441870915856 H1_P_Z = 385.1755809960915 # Orientation: H1_DX_X = -0.8955935528354075 H1_DX_Y = 0.15928458854158123 H1_DX_Z = -0.4153800765237179 H1_DY_X = 0.013688974944329857 H1_DY_Y = 0.9431291932400683 H1_DY_Z = 0.33214445174240836 H1_DZ_X = 0.444662568791955 H1_DZ_Y = 0.2917803021306611 H1_DZ_Z = -0.8468408676981767 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 105 H2_OUTID2_ORIG = 77 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -854.6636227917068 H2_P_Y = -69.93528635757727 H2_P_Z = 404.40196790861444 # Orientation: H2_DX_X = 0.4162117220598702 H2_DX_Y = -0.8883135367907613 H2_DX_Z = 0.1940795269323985 H2_DY_X = 0.869969892340805 H2_DY_Y = 0.4511185164947591 H2_DY_Z = 0.19910919239475788 H2_DZ_X = -0.2644242591754846 H2_DZ_Y = 0.08597176530635409 H2_DZ_Z = 0.9605668465700887 ############# END of Description of junction: j28