############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 40.166872626721826 H1_P_Y = 129.6085057088117 H1_P_Z = 14.480188397189883 # Orientation: H1_DX_X = 0.11298275995253704 H1_DX_Y = -0.7857441434740338 H1_DX_Z = 0.6081455721698266 H1_DY_X = 0.6135084439462659 H1_DY_Y = 0.5366192305140203 H1_DY_Z = 0.579350662940131 H1_DZ_X = -0.7815639994012855 H1_DZ_Y = 0.30764580679542064 H1_DZ_Z = 0.5426893885097286 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.93854981075199 H2_P_Y = 120.25693263535638 H2_P_Z = 1.129820031908067 # Orientation: H2_DX_X = -0.943587534167925 H2_DX_Y = -0.3310255603886816 H2_DX_Z = 0.008040132602424865 H2_DY_X = -0.21968183477061132 H2_DY_Y = 0.6076653620846599 H2_DY_Z = -0.7632055419048925 H2_DZ_X = 0.24775483211175242 H2_DZ_Y = -0.7219175064312253 H2_DZ_Z = -0.6461057630708718 ############# END of Description of junction: j4