############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 18:48:62:146:149:157 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.1112568260063 H1_P_Y = 113.99341513802354 H1_P_Z = 89.17368462502415 # Orientation: H1_DX_X = 0.7214433192723391 H1_DX_Y = -0.5133158553816486 H1_DX_Z = 0.46478636994982025 H1_DY_X = -0.564971887813158 H1_DY_Y = -0.8244275218227699 H1_DY_Z = -0.033556329388105155 H1_DZ_X = 0.40040767107805664 H1_DZ_Y = -0.2383822432040148 H1_DZ_Z = -0.8847867557026774 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.69795234833319 H2_P_Y = 99.91237841818118 H2_P_Z = 103.74829652903647 # Orientation: H2_DX_X = -0.9825567141100464 H2_DX_Y = -0.1480330708825477 H2_DX_Z = 0.11255449116920602 H2_DY_X = 0.1578112158803151 H2_DY_Y = -0.9839278459022722 H2_DY_Z = 0.08355605424193868 H2_DZ_X = 0.09837643874249125 H2_DZ_Y = 0.09986092320416162 H2_DZ_Z = 0.990126190097584 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.70951800105547 H3_P_Y = 112.91945300652878 H3_P_Z = 105.36563229740122 # Orientation: H3_DX_X = 0.8644011402747651 H3_DX_Y = 0.4753437726959646 H3_DX_Z = -0.16388705394521708 H3_DY_X = -0.5017121879221236 H3_DY_Y = 0.7939651306827926 H3_DY_Z = -0.34337188549771724 H3_DZ_X = -0.033099081287389254 H3_DZ_Y = 0.37903518176949547 H3_DZ_Z = 0.9247901285150562 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.43808418550745 H4_P_Y = 129.79709670591288 H4_P_Z = 93.33123035674765 # Orientation: H4_DX_X = -0.2981463091951184 H4_DX_Y = -0.8158812278953462 H4_DX_Z = 0.49542567583975483 H4_DY_X = 0.661044170081567 H4_DY_Y = 0.19792940916789803 H4_DY_Z = 0.7237710647626301 H4_DZ_X = -0.6885705363392276 H4_DZ_Y = 0.5432879263837833 H4_DZ_Z = 0.48032160635465004 ############# END of Description of junction: j53