############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS5HS6 FINGERPRINT = 39:137:145 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 864 S1_NAME_ID3 = 872 S1_NUM_ID5_ORIG = 864 S1_NUM_ID3_ORIG = 872 S1_NAME2_ID5 = 866 S1_NAME2_ID3 = 870 S1_NUM2_ID5_ORIG = 866 S1_NUM2_ID3_ORIG = 870 S1_SQ2 = UAGGG S1_SQLEN2 = 5 S1_SQ = UGUAGGGGU S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 772 S2_NAME_ID3 = 782 S2_NUM_ID5_ORIG = 772 S2_NUM_ID3_ORIG = 782 S2_NAME2_ID5 = 774 S2_NAME2_ID3 = 780 S2_NUM2_ID5_ORIG = 774 S2_NUM2_ID3_ORIG = 780 S2_SQ2 = CGAUCUA S2_SQLEN2 = 7 S2_SQ = GACGAUCUACG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 878 S3_NAME_ID3 = 889 S3_NUM_ID5_ORIG = 878 S3_NUM_ID3_ORIG = 889 S3_NAME2_ID5 = 880 S3_NAME2_ID3 = 887 S3_NUM2_ID5_ORIG = 880 S3_NUM2_ID3_ORIG = 887 S3_SQ2 = CCAUCGAG S3_SQLEN2 = 8 S3_SQ = GCCCAUCGAGUC S3_SQLEN = 12 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 866 H1_OUTID2_ORIG = 780 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 92.10838171675375 H1_P_Y = 148.29711620868002 H1_P_Z = 67.11578527065456 # Orientation: H1_DX_X = 0.696139294167466 H1_DX_Y = -0.7159629916336883 H1_DX_Z = -0.052792781011760326 H1_DY_X = 0.21862816101283045 H1_DY_Y = 0.2814693678746778 H1_DY_Z = -0.9343322332877051 H1_DZ_X = 0.6838068516241833 H1_DZ_Y = 0.6388833927714472 H1_DZ_Z = 0.3524715592961485 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 880 H2_OUTID2_ORIG = 870 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 92.16397435828503 H2_P_Y = 128.51983373031243 H2_P_Z = 73.28944005832419 # Orientation: H2_DX_X = 0.08853704214064351 H2_DX_Y = 0.8054957080743179 H2_DX_Z = -0.5859503873561778 H2_DY_X = -0.2010828069664825 H2_DY_Y = 0.5906027223139745 H2_DY_Z = 0.7815076001791539 H2_DZ_X = 0.9755649116852538 H2_DZ_Y = 0.04863217730238034 H2_DZ_Z = 0.21426155609293573 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 774 H3_OUTID2_ORIG = 887 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 72.59321881522816 H3_P_Y = 126.15932640340829 H3_P_Z = 62.337720511486495 # Orientation: H3_DX_X = -0.3675032526470545 H3_DX_Y = 0.9297466758586239 H3_DX_Z = 0.02263797746457641 H3_DY_X = -0.28220816631852585 H3_DY_Y = -0.08828939188305185 H3_DY_Z = -0.9552819134391939 H3_DZ_X = -0.8861714902641467 H3_DZ_Y = -0.3574578324932389 H3_DZ_Z = 0.2948287432260699 ############# END of Description of junction: j12