############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 9:75:78:78:86:137 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 446 S1_NAME_ID3 = 467 S1_NUM_ID5_ORIG = 446 S1_NUM_ID3_ORIG = 467 S1_NAME2_ID5 = 448 S1_NAME2_ID3 = 465 S1_NUM2_ID5_ORIG = 448 S1_NUM2_ID3_ORIG = 465 S1_SQ2 = GACCGAUAGUGAACAAGU S1_SQLEN2 = 18 S1_SQ = GAGACCGAUAGUGAACAAGUAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 25 S2_NAME_ID3 = 36 S2_NUM_ID5_ORIG = 25 S2_NUM_ID3_ORIG = 36 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 34 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 34 S2_SQ2 = UGCUCGGC S2_SQLEN2 = 8 S2_SQ = AUUGCUCGGCUC S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 474 S3_NAME_ID3 = 491 S3_NUM_ID5_ORIG = 474 S3_NUM_ID3_ORIG = 491 S3_NAME2_ID5 = 476 S3_NAME2_ID3 = 489 S3_NUM2_ID5_ORIG = 476 S3_NUM2_ID3_ORIG = 489 S3_SQ2 = AACGCUGCAAAGUA S3_SQLEN2 = 14 S3_SQ = CGAACGCUGCAAAGUACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 501 S4_NAME_ID3 = 518 S4_NUM_ID5_ORIG = 501 S4_NUM_ID3_ORIG = 518 S4_NAME2_ID5 = 503 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 503 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = GGCGAAAUAGAGCA S4_SQLEN2 = 14 S4_SQ = GAGGCGAAAUAGAGCAUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 448 H1_OUTID2_ORIG = 34 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 45.16804418343105 H1_P_Y = 127.10076691984654 H1_P_Z = 36.83047371543552 # Orientation: H1_DX_X = -0.19565713474990076 H1_DX_Y = -0.9313985467846067 H1_DX_Z = 0.3069446736286068 H1_DY_X = -0.5779572868543212 H1_DY_Y = -0.14334507014513065 H1_DY_Z = -0.8033788430355173 H1_DZ_X = 0.7922648926927494 H1_DZ_Y = -0.3345877133317856 H1_DZ_Z = -0.5102620913745639 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 476 H2_OUTID2_ORIG = 465 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 62.936269276784 H2_P_Y = 143.88647652022328 H2_P_Z = 55.775698583760075 # Orientation: H2_DX_X = -0.6481886432985533 H2_DX_Y = 0.42431467882292395 H2_DX_Z = 0.6323041483607312 H2_DY_X = 0.23509328377761562 H2_DY_Y = -0.6782885613778546 H2_DY_Z = 0.6961722311516212 H2_DZ_X = 0.7242807678113792 H2_DZ_Y = 0.599901392596621 H2_DZ_Z = 0.3399054111649136 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 503 H3_OUTID2_ORIG = 489 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 25.021169395206925 H3_P_Y = 171.0480613732018 H3_P_Z = 65.9858645317709 # Orientation: H3_DX_X = -0.709100786292236 H3_DX_Y = 0.6907192142878102 H3_DX_Z = -0.14171464953675184 H3_DY_X = -0.34157894823984236 H3_DY_Y = -0.16067864105562535 H3_DY_Z = 0.9260163046231185 H3_DZ_X = 0.6168467370417723 H3_DZ_Y = 0.705045630666632 H3_DZ_Z = 0.3498724934583919 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 27.205151452838617 H4_P_Y = 141.57353892100247 H4_P_Z = 68.8553451668943 # Orientation: H4_DX_X = -0.7555201976651844 H4_DX_Y = -0.6440513732333386 H4_DX_Z = -0.11994606936539753 H4_DY_X = 0.6043273574747161 H4_DY_Y = -0.7558458224708602 H4_DY_Z = 0.2519633657121858 H4_DZ_X = -0.2529380871430611 H4_DZ_Y = 0.11787672072819078 H4_DZ_Z = 0.9602746496616419 ############# END of Description of junction: j1