############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 11:74:78:79:88:138 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 446 S1_NAME_ID3 = 467 S1_NUM_ID5_ORIG = 446 S1_NUM_ID3_ORIG = 467 S1_NAME2_ID5 = 448 S1_NAME2_ID3 = 465 S1_NUM2_ID5_ORIG = 448 S1_NUM2_ID3_ORIG = 465 S1_SQ2 = GACCGAUAGUGAACAAGU S1_SQLEN2 = 18 S1_SQ = GAGACCGAUAGUGAACAAGUAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 25 S2_NAME_ID3 = 36 S2_NUM_ID5_ORIG = 25 S2_NUM_ID3_ORIG = 36 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 34 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 34 S2_SQ2 = UGCUCGGC S2_SQLEN2 = 8 S2_SQ = AUUGCUCGGCUC S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 474 S3_NAME_ID3 = 491 S3_NUM_ID5_ORIG = 474 S3_NUM_ID3_ORIG = 491 S3_NAME2_ID5 = 476 S3_NAME2_ID3 = 489 S3_NUM2_ID5_ORIG = 476 S3_NUM2_ID3_ORIG = 489 S3_SQ2 = AACGCUGCAAAGUA S3_SQLEN2 = 14 S3_SQ = CGAACGCUGCAAAGUACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 501 S4_NAME_ID3 = 518 S4_NUM_ID5_ORIG = 501 S4_NUM_ID3_ORIG = 518 S4_NAME2_ID5 = 503 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 503 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = GGCGAAAUAGAGCA S4_SQLEN2 = 14 S4_SQ = GAGGCGAAAUAGAGCAUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 448 H1_OUTID2_ORIG = 34 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 45.33287417451433 H1_P_Y = 126.48155153623917 H1_P_Z = 37.10314759400774 # Orientation: H1_DX_X = -0.1869717625051237 H1_DX_Y = -0.9310719233810261 H1_DX_Z = 0.3132836311033458 H1_DY_X = -0.5829648063395538 H1_DY_Y = -0.15152287812635734 H1_DY_Z = -0.7982436044052008 H1_DZ_X = 0.7906918455347949 H1_DZ_Y = -0.33188234495959534 H1_DZ_Z = -0.5144516639188836 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 476 H2_OUTID2_ORIG = 465 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 63.16161677941556 H2_P_Y = 143.4902903451039 H2_P_Z = 55.8603690029581 # Orientation: H2_DX_X = -0.6353544614499356 H2_DX_Y = 0.4245296527722644 H2_DX_Z = 0.6450575805559708 H2_DY_X = 0.24964361139413427 H2_DY_Y = -0.6775560869880906 H2_DY_Z = 0.691806198494568 H2_DZ_X = 0.7307549353960994 H2_DZ_Y = 0.6005766586393975 H2_DZ_Z = 0.32450716708847693 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 503 H3_OUTID2_ORIG = 489 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 25.048485697462308 H3_P_Y = 170.84346336164805 H3_P_Z = 66.24675445033368 # Orientation: H3_DX_X = -0.7256102147223231 H3_DX_Y = 0.6733319365377497 H3_DX_Z = -0.1418235506850607 H3_DY_X = -0.3518895530668864 H3_DY_Y = -0.18598366111265818 H3_DY_Z = 0.9173787768645667 H3_DZ_X = 0.5913235651764666 H3_DZ_Y = 0.7155656371273267 H3_DZ_Z = 0.37189011848875 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 27.650509596652977 H4_P_Y = 141.02120224563163 H4_P_Z = 69.1192274314388 # Orientation: H4_DX_X = -0.7558851319828435 H4_DX_Y = -0.64101362240703 H4_DX_Z = -0.1331885998721276 H4_DY_X = 0.5978423100447188 H4_DY_Y = -0.7587266696721713 H4_DY_Z = 0.25868593515797045 H4_DZ_X = -0.26687495118065385 H4_DZ_Y = 0.11591107201982709 H4_DZ_Z = 0.9567352736340098 ############# END of Description of junction: j1