############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 60:127:173 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.35451840201653 H1_P_Y = 155.84950167479073 H1_P_Z = 42.64476170524626 # Orientation: H1_DX_X = 0.19586819045166237 H1_DX_Y = 0.8298776335682589 H1_DX_Z = -0.5224354173219155 H1_DY_X = -0.7185852984997894 H1_DY_Y = -0.24105835161208233 H1_DY_Z = -0.6523235699390426 H1_DZ_X = -0.6672861610651992 H1_DZ_Y = 0.5031838475360644 H1_DZ_Z = 0.5491222039124466 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 46.87046510391383 H2_P_Y = 152.70969082230826 H2_P_Z = 20.837162810544935 # Orientation: H2_DX_X = 0.4437004287593709 H2_DX_Y = 0.7689891851164816 H2_DX_Z = -0.46020165437841953 H2_DY_X = 0.18680802754148118 H2_DY_Y = -0.5816003765803544 H2_DY_Z = -0.7917346542924832 H2_DZ_X = -0.8764888421222565 H2_DZ_Y = 0.2653236422474663 H2_DZ_Z = -0.4017096893276566 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 67.55006575257293 H3_P_Y = 148.3389703978744 H3_P_Z = 31.554348782964958 # Orientation: H3_DX_X = 0.6473403072166519 H3_DX_Y = 0.4098526535659346 H3_DX_Z = 0.642628453320917 H3_DY_X = -0.10190990854660242 H3_DY_Y = -0.7890104875153554 H3_DY_Z = 0.6058686500643873 H3_DZ_X = 0.7553574631872522 H3_DZ_Y = -0.4576934049729857 H3_DZ_Z = -0.46899024494283736 ############# END of Description of junction: j1