############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 13:23:153:156:169:176 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 97.20812424216815 H1_P_Y = 139.27450071671328 H1_P_Z = 91.72401567682215 # Orientation: H1_DX_X = -0.06276494738501981 H1_DX_Y = 0.2611298318205115 H1_DX_Z = -0.9632610094430021 H1_DY_X = -0.43413790786227935 H1_DY_Y = -0.876208685817403 H1_DY_Z = -0.2092429589140039 H1_DZ_X = -0.8986572418540391 H1_DZ_Y = 0.40505499605797013 H1_DZ_Z = 0.16836155093062644 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 110.7304495214672 H2_P_Y = 129.89797465846092 H2_P_Z = 77.83306316739946 # Orientation: H2_DX_X = 0.6648443463022176 H2_DX_Y = 0.5698027930643832 H2_DX_Z = 0.4830183973784301 H2_DY_X = 0.18135364287365974 H2_DY_Y = -0.7504063931729661 H2_DY_Z = 0.6356108096166793 H2_DZ_X = 0.7246329080344225 H2_DZ_Y = -0.3349851072826482 H2_DZ_Z = -0.6022392601718991 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.51804697808802 H3_P_Y = 128.9495355721367 H3_P_Z = 93.3020618374687 # Orientation: H3_DX_X = 0.5125485436835788 H3_DX_Y = 0.839728975448935 H3_DX_Z = -0.17930208632178335 H3_DY_X = 0.5154056308322055 H3_DY_Y = -0.1338577465477897 H3_DY_Z = 0.8464272794491023 H3_DZ_X = 0.6867685389374714 H3_DZ_Y = -0.5262483743258883 H3_DZ_Z = -0.5014096353731503 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 104.51954438290805 H4_P_Y = 139.41055004602237 H4_P_Z = 103.86857350307837 # Orientation: H4_DX_X = -0.3405054059413004 H4_DX_Y = 0.49064987542493554 H4_DX_Z = -0.8020715480991782 H4_DY_X = -0.5563717544644504 H4_DY_Y = -0.7928142720622873 H4_DY_Z = -0.24878906898916853 H4_DZ_X = -0.7579620962547438 H4_DZ_Y = 0.36153593149202834 H4_DZ_Z = 0.5429412775625906 ############# END of Description of junction: j53