#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 36:66:74:79:108:109:114:119:125:172
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AC
S3_SQLEN2 = 2
S3_SQ = ACACUG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = GA
S4_SQLEN2 = 2
S4_SQ = CAGACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 60.222116083332416
H1_P_Y = -63.19050607155762
H1_P_Z = 15.703198855634293
# Orientation:
H1_DX_X = 0.2283756227057907
H1_DX_Y = 0.6551949955311756
H1_DX_Z = 0.7201139443064815
H1_DY_X = -0.948600599994549
H1_DY_Y = -0.016702995233139006
H1_DY_Z = 0.3160346684150763
H1_DZ_X = 0.21909239293898253
H1_DZ_Y = -0.7552751338294854
H1_DZ_Z = 0.6177038089368789
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 65.60030510727705
H2_P_Y = -32.757118256585855
H2_P_Z = 6.914339183475914
# Orientation:
H2_DX_X = 0.869050953770909
H2_DX_Y = -0.3099096063733242
H2_DX_Z = -0.38562478606465955
H2_DY_X = -0.33713163303400506
H2_DY_Y = 0.19948229042009302
H2_DY_Z = -0.920081016985228
H2_DZ_X = 0.3620672613724025
H2_DZ_Y = 0.9296035992218883
H2_DZ_Z = 0.06887994306042078
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 63.59558552249693
H3_P_Y = -50.739725210934914
H3_P_Z = -5.872552091380255
# Orientation:
H3_DX_X = 0.09282255707667275
H3_DX_Y = 0.7035984804184992
H3_DX_Z = -0.7045091562574051
H3_DY_X = -0.6037481295744414
H3_DY_Y = -0.522871349464431
H3_DY_Z = -0.6017422603944382
H3_DZ_X = -0.7917525932594742
H3_DZ_Y = 0.4812013406693936
H3_DZ_Z = 0.37626201084466526
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 75.70593560253403
H4_P_Y = -60.811853051799446
H4_P_Z = -12.915444464812017
# Orientation:
H4_DX_X = 0.689687019848364
H4_DX_Y = 0.6223018088980155
H4_DX_Z = 0.3702327285572409
H4_DY_X = -0.008955760298604787
H4_DY_Y = -0.5039253114149034
H4_DY_Z = 0.8637008017090562
H4_DZ_X = 0.7240522142844128
H4_DZ_Y = -0.5989989475430235
H4_DZ_Z = -0.34197756042202343
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 81.36874845026416
H5_P_Y = -46.981284033417445
H5_P_Z = 3.6295694130099863
# Orientation:
H5_DX_X = 0.15094355375617852
H5_DX_Y = 0.2798799678165409
H5_DX_Z = 0.9480945349460006
H5_DY_X = 0.6602000545474596
H5_DY_Y = -0.7423811755331116
H5_DY_Z = 0.11404419401969923
H5_DZ_X = 0.7357662207216293
H5_DZ_Y = 0.6087178277569052
H5_DZ_Z = -0.29683442289588413
#############  END of Description of junction: j1