############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS20HS5 FINGERPRINT = 16:170:173 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1826 S1_NAME_ID3 = 1831 S1_NUM_ID5_ORIG = 1826 S1_NUM_ID3_ORIG = 1831 S1_NAME2_ID5 = 1828 S1_NAME2_ID3 = 1829 S1_NUM2_ID5_ORIG = 1828 S1_NUM2_ID3_ORIG = 1829 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = GUGACG S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1768 S2_NAME_ID3 = 1793 S2_NUM_ID5_ORIG = 1768 S2_NUM_ID3_ORIG = 1793 S2_NAME2_ID5 = 1770 S2_NAME2_ID3 = 1791 S2_NUM2_ID5_ORIG = 1770 S2_NUM2_ID3_ORIG = 1791 S2_SQ2 = GCAACUGUUUAUUAAAAACACA S2_SQLEN2 = 22 S2_SQ = CUGCAACUGUUUAUUAAAAACACAGC S2_SQLEN = 26 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1974 S3_NAME_ID3 = 1984 S3_NUM_ID5_ORIG = 1974 S3_NUM_ID3_ORIG = 1984 S3_NAME2_ID5 = 1976 S3_NAME2_ID3 = 1982 S3_NUM2_ID5_ORIG = 1976 S3_NUM2_ID3_ORIG = 1982 S3_SQ2 = UAAUGAU S3_SQLEN2 = 7 S3_SQ = CGUAAUGAUGG S3_SQLEN = 11 S3_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 26 H1_INID2 = 3 H1_OUTID2 = 24 H1_INID2_ORIG = 1828 H1_OUTID2_ORIG = 1791 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 62.993688318482164 H1_P_Y = -3.28695420897162 H1_P_Z = -78.05641775066022 # Orientation: H1_DX_X = 0.10824158028480468 H1_DX_Y = 0.1712081718608891 H1_DX_Z = 0.9792709135808622 H1_DY_X = 0.9705675375366525 H1_DY_Y = 0.19497189428750206 H1_DY_Z = -0.14136695341547068 H1_DZ_X = -0.21513348269731836 H1_DZ_Y = 0.965750341613191 H1_DZ_Z = -0.14506502782037956 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1976 H2_OUTID2_ORIG = 1829 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 71.42400455602048 H2_P_Y = -7.388861561297041 H2_P_Z = -65.11157166540353 # Orientation: H2_DX_X = -0.5309007357087978 H2_DX_Y = 0.1615293273066989 H2_DX_Z = 0.8318970400498529 H2_DY_X = 0.8452238532700562 H2_DY_Y = 0.030078656140273274 H2_DY_Z = 0.5335652840169729 H2_DZ_X = 0.061164096389703104 H2_DZ_Y = 0.9864094235481726 H2_DZ_Z = -0.15249722111629183 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 11 H3_INID2 = 3 H3_OUTID2 = 9 H3_INID2_ORIG = 1770 H3_OUTID2_ORIG = 1982 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 70.7941120275909 H3_P_Y = -34.53879152227723 H3_P_Z = -57.096141056575476 # Orientation: H3_DX_X = 0.818765996525201 H3_DX_Y = -0.026250503907000677 H3_DX_Z = -0.5735269426789955 H3_DY_X = 0.5637755207202275 H3_DY_Y = 0.2256031609566307 H3_DY_Z = 0.7945189588694461 H3_DZ_X = 0.10853296812818769 H3_DZ_Y = -0.9738655578728483 H3_DZ_Z = 0.1995155884092341 ############# END of Description of junction: j28