############# Start of Description of junction: j20 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 37:47:134:138:155:171 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1292 S1_NAME_ID3 = 1297 S1_NUM_ID5_ORIG = 1292 S1_NUM_ID3_ORIG = 1297 S1_NAME2_ID5 = 1294 S1_NAME2_ID3 = 1295 S1_NUM2_ID5_ORIG = 1294 S1_NUM2_ID3_ORIG = 1295 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GCUCGC S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1268 S2_NAME_ID3 = 1278 S2_NUM_ID5_ORIG = 1268 S2_NUM_ID3_ORIG = 1278 S2_NAME2_ID5 = 1270 S2_NAME2_ID3 = 1276 S2_NUM2_ID5_ORIG = 1270 S2_NUM2_ID3_ORIG = 1276 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAGC S2_SQLEN = 11 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1643 S3_NAME_ID3 = 1650 S3_NUM_ID5_ORIG = 1643 S3_NUM_ID3_ORIG = 1650 S3_NAME2_ID5 = 1645 S3_NAME2_ID3 = 1648 S3_NUM2_ID5_ORIG = 1645 S3_NUM2_ID3_ORIG = 1648 S3_SQ2 = GCUU S3_SQLEN2 = 4 S3_SQ = GCGCUUGA S3_SQLEN = 8 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 2007 S4_NAME_ID3 = 2012 S4_NUM_ID5_ORIG = 2007 S4_NUM_ID3_ORIG = 2012 S4_NAME2_ID5 = 2009 S4_NAME2_ID3 = 2010 S4_NUM2_ID5_ORIG = 2009 S4_NUM2_ID3_ORIG = 2010 S4_SQ2 = AG S4_SQLEN2 = 2 S4_SQ = UCAGUG S4_SQLEN = 6 S4_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1294 H1_OUTID2_ORIG = 1276 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 36.83881992027869 H1_P_Y = -76.60257851229632 H1_P_Z = -87.43265184944477 # Orientation: H1_DX_X = 0.23961076618368793 H1_DX_Y = -0.6529024372871675 H1_DX_Z = 0.7185437273495268 H1_DY_X = -0.9568531475168669 H1_DY_Y = -0.28411412708653927 H1_DY_Z = 0.06091975768926261 H1_DZ_X = 0.16437376559516537 H1_DZ_Y = -0.7021378569585437 H1_DZ_Z = -0.6928085558144659 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1645 H2_OUTID2_ORIG = 1295 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 33.37718502028087 H2_P_Y = -62.329614189926886 H2_P_Z = -74.71415510058499 # Orientation: H2_DX_X = 0.9976472650333505 H2_DX_Y = 0.003403563761253281 H2_DX_Z = 0.06847152930377831 H2_DY_X = 0.040378574504586595 H2_DY_Y = 0.7779743163528394 H2_DY_Z = -0.626997235892091 H2_DZ_X = -0.05540311627022021 H2_DZ_Y = 0.6282868603186387 H2_DZ_Z = 0.7760065179226814 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2009 H3_OUTID2_ORIG = 1648 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 59.89972382312307 H3_P_Y = -74.1472114955353 H3_P_Z = -84.3971996735749 # Orientation: H3_DX_X = -0.8130121572853994 H3_DX_Y = -0.5731448335933607 H3_DX_Z = -0.10254868030057196 H3_DY_X = 0.5611800307447652 H3_DY_Y = -0.8182946729391318 H3_DY_Z = 0.12438167603293948 H3_DZ_X = -0.15520375381885998 H3_DZ_Y = 0.04357554319439316 H3_DZ_Z = 0.9869209526785028 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1270 H4_OUTID2_ORIG = 2010 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = 65.17249345570534 H4_P_Y = -75.49643656027675 H4_P_Z = -98.6678750275853 # Orientation: H4_DX_X = -0.5890128655643139 H4_DX_Y = 0.6887325333577081 H4_DX_Z = -0.42274264238942294 H4_DY_X = 0.5810787064998522 H4_DY_Y = 0.7245021322790137 H4_DY_Z = 0.37073467220591283 H4_DZ_X = 0.5616149758083111 H4_DZ_Y = -0.02727925618192728 H4_DZ_Z = -0.826948886648978 ############# END of Description of junction: j20