#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 168
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 84.02716148554367
H1_P_Y = 14.799893238635601
H1_P_Z = 20.014741861724445
# Orientation:
H1_DX_X = 0.05873361684855638
H1_DX_Y = -0.431318155001442
H1_DX_Z = -0.9002860719893633
H1_DY_X = -0.017819409381175433
H1_DY_Y = 0.9012462632355298
H1_DY_Z = -0.43294069068787877
H1_DZ_X = 0.998114638155954
H1_DZ_Y = 0.04147073872196039
H1_DZ_Z = 0.04524761793356191
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 66.00857190112316
H2_P_Y = 12.62688810598616
H2_P_Z = 18.81701889368044
# Orientation:
H2_DX_X = 0.20573725956064948
H2_DX_Y = -0.9163627881430916
H2_DX_Z = 0.3434405633222326
H2_DY_X = 0.05676412949159726
H2_DY_Y = 0.3615321547324335
H2_DY_Z = 0.9306300740345677
H2_DZ_X = -0.9769595762525398
H2_DZ_Y = -0.17197017648751256
H2_DZ_Z = 0.1263971707251521
#############  END of Description of junction: j1