#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 7:50:51:79:96:99:101:108:135:141
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.61937288786507
H1_P_Y = 84.32957290810151
H1_P_Z = 25.63581821226812
# Orientation:
H1_DX_X = -0.05327715603624483
H1_DX_Y = -0.3807999671061424
H1_DX_Z = 0.923121297390896
H1_DY_X = -0.8978194315363055
H1_DY_Y = 0.4229385410471309
H1_DY_Z = 0.12265096352162885
H1_DZ_X = -0.43712905760261833
H1_DZ_Y = -0.8222617439409987
H1_DZ_Z = -0.36442257264138433
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 155.29519641549763
H2_P_Y = 97.47032911232249
H2_P_Z = 48.268078650532836
# Orientation:
H2_DX_X = -0.7334009920785434
H2_DX_Y = 0.3285057704142389
H2_DX_Z = -0.595152874161542
H2_DY_X = -0.28951042542331606
H2_DY_Y = 0.6411882438210057
H2_DY_Z = 0.7106766842643353
H2_DZ_X = 0.6150664178683485
H2_DZ_Y = 0.6935139470769798
H2_DZ_Z = -0.37514224878078295
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 137.35026873778418
H3_P_Y = 85.53010933424315
H3_P_Z = 47.689739084855226
# Orientation:
H3_DX_X = 0.794264472829866
H3_DX_Y = -0.3537859757891795
H3_DX_Z = -0.4939427401381309
H3_DY_X = 0.298303621988282
H3_DY_Y = -0.4811696776169754
H3_DY_Z = 0.8243122530028586
H3_DZ_X = -0.529300383817116
H3_DZ_Y = -0.8020668455165492
H3_DZ_Z = -0.2766403423475978
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.8750952045269
H4_P_Y = 96.30470398735321
H4_P_Z = 28.31900708438563
# Orientation:
H4_DX_X = -0.27010238510274576
H4_DX_Y = -0.8568280112327784
H4_DX_Z = -0.4391929652541222
H4_DY_X = -0.2585407854913342
H4_DY_Y = 0.5039378432256427
H4_DY_Z = -0.8241379207405757
H4_DZ_X = 0.9274704112796996
H4_DZ_Y = -0.10905232382656038
H4_DZ_Z = -0.3576398004538852
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 155.04159634340766
H5_P_Y = 82.18355178004057
H5_P_Z = 19.88812414347856
# Orientation:
H5_DX_X = -0.15179084404130094
H5_DX_Y = 0.8315287160181981
H5_DX_Z = 0.5343402793186591
H5_DY_X = 0.9862461909326043
H5_DY_Y = 0.16319172059654363
H5_DY_Z = 0.02620902897229982
H5_DZ_X = -0.06540634935663547
H5_DZ_Y = 0.530969355769102
H5_DZ_Z = -0.8448630378339317
#############  END of Description of junction: j9