############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 19:19:29:41:109:127:134:150:153:167 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2423 S1_NAME_ID3 = 2436 S1_NUM_ID5_ORIG = 2423 S1_NUM_ID3_ORIG = 2436 S1_NAME2_ID5 = 2425 S1_NAME2_ID3 = 2434 S1_NUM2_ID5_ORIG = 2425 S1_NUM2_ID3_ORIG = 2434 S1_SQ2 = GGAUAACAGG S1_SQLEN2 = 10 S1_SQ = GGGGAUAACAGGCU S1_SQLEN = 14 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2035 S2_NAME_ID3 = 2049 S2_NUM_ID5_ORIG = 2035 S2_NUM_ID3_ORIG = 2049 S2_NAME2_ID5 = 2037 S2_NAME2_ID3 = 2047 S2_NUM2_ID5_ORIG = 2037 S2_NUM2_ID3_ORIG = 2047 S2_SQ2 = ACGAAAAGACC S2_SQLEN2 = 11 S2_SQ = GGACGAAAAGACCCC S2_SQLEN = 15 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2473 S3_NAME_ID3 = 2489 S3_NUM_ID5_ORIG = 2473 S3_NUM_ID3_ORIG = 2489 S3_NAME2_ID5 = 2475 S3_NAME2_ID3 = 2487 S3_NUM2_ID5_ORIG = 2475 S3_NUM2_ID3_ORIG = 2487 S3_SQ2 = CACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GGCACCUCGAUGUCGGC S3_SQLEN = 17 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2557 S4_NAME_ID3 = 2569 S4_NUM_ID5_ORIG = 2557 S4_NUM_ID3_ORIG = 2569 S4_NAME2_ID5 = 2559 S4_NAME2_ID3 = 2567 S4_NUM2_ID5_ORIG = 2559 S4_NUM2_ID3_ORIG = 2567 S4_SQ2 = UGGGUUCAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUCAGAA S4_SQLEN = 13 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2583 S5_NAME_ID3 = 2596 S5_NUM_ID5_ORIG = 2583 S5_NUM_ID3_ORIG = 2596 S5_NAME2_ID5 = 2585 S5_NAME2_ID3 = 2594 S5_NUM2_ID5_ORIG = 2585 S5_NUM2_ID3_ORIG = 2594 S5_SQ2 = CGGUCUCUAU S5_SQLEN2 = 10 S5_SQ = UUCGGUCUCUAUCC S5_SQLEN = 14 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2425 H1_OUTID2_ORIG = 2047 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 48.90518772426619 H1_P_Y = 134.89086695426306 H1_P_Z = 103.24441023126808 # Orientation: H1_DX_X = 0.25798625670695685 H1_DX_Y = -0.4591585693448792 H1_DX_Z = -0.8500685263833248 H1_DY_X = -0.9415900619785447 H1_DY_Y = 0.07762769902254263 H1_DY_Z = -0.3276920742521696 H1_DZ_X = 0.2164514877139041 H1_DZ_Y = 0.8849561280321439 H1_DZ_Z = -0.41231226627981243 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2475 H2_OUTID2_ORIG = 2434 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 64.60762080513798 H2_P_Y = 105.35503522116632 H2_P_Z = 104.66390236708796 # Orientation: H2_DX_X = -0.12002454186118428 H2_DX_Y = -0.28467480833933223 H2_DX_Z = -0.9510806289941911 H2_DY_X = 0.7660133790515857 H2_DY_Y = 0.5828498700328311 H2_DY_Z = -0.27112641353562594 H2_DZ_X = 0.6315200808089827 H2_DZ_Y = -0.7610823099374215 H2_DZ_Z = 0.1481084232423342 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2559 H3_OUTID2_ORIG = 2487 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 56.88601937747956 H3_P_Y = 106.39444402990861 H3_P_Z = 125.49901714672583 # Orientation: H3_DX_X = 0.5091828709382682 H3_DX_Y = 0.23937834090415322 H3_DX_Z = 0.8266987443132194 H3_DY_X = -0.8420052073977402 H3_DY_Y = -0.06034436849043345 H3_DY_Z = 0.5360837508324323 H3_DZ_X = 0.17821345251736886 H3_DZ_Y = -0.9690493109731193 H3_DZ_Z = 0.17083149078659687 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2585 H4_OUTID2_ORIG = 2567 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 66.52339221332709 H4_P_Y = 138.72740400114327 H4_P_Z = 118.19461129354302 # Orientation: H4_DX_X = 0.1642781826743942 H4_DX_Y = 0.5471877240561014 H4_DX_Z = 0.8207303292430908 H4_DY_X = 0.8769633012656044 H4_DY_Y = -0.46194456128233696 H4_DY_Z = 0.13244844481913276 H4_DZ_X = 0.4516060749486712 H4_DZ_Y = 0.6979919891688837 H4_DZ_Z = -0.555750965924048 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2037 H5_OUTID2_ORIG = 2594 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 39.28607484973924 H5_P_Y = 100.7758446833348 H5_P_Z = 127.37249992682321 # Orientation: H5_DX_X = -0.36410809071540484 H5_DX_Y = -0.42795399148104707 H5_DX_Z = -0.8272125962840562 H5_DY_X = 0.9312604140777623 H5_DY_Y = -0.15451770406548349 H5_DY_Z = -0.3299671503378079 H5_DZ_X = 0.013391767892834139 H5_DZ_Y = -0.8904940540541304 H5_DZ_Z = 0.454797757521888 ############# END of Description of junction: j55