############# Start of Description of junction: j19 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS5HS2HS4HS2 FINGERPRINT = 60:67:86:90:98:112:113:114:155:158 LOOP_LENGTH_SUM = 13 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 680 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 680 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACU S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 599 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 599 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1211 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1211 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1210 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1210 S4_SQ2 = GC S4_SQLEN2 = 2 S4_SQ = AGCG S4_SQLEN = 4 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1262 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1262 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1263 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1263 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = GCGGAUG S5_SQLEN2 = 7 S5_SQ = UGCGGAUGC S5_SQLEN = 9 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 19.96530799814934 H1_P_Y = 138.0163543539428 H1_P_Z = 78.41522041612569 # Orientation: H1_DX_X = -0.708158577667362 H1_DX_Y = 0.5590351555597977 H1_DX_Z = 0.4312668822485506 H1_DY_X = 0.5547783293906399 H1_DY_Y = 0.8183876144840951 H1_DY_Z = -0.14987567413562886 H1_DZ_X = -0.436729245774405 H1_DZ_Y = 0.1331217762325423 H1_DZ_Z = -0.8896887987257145 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 31.58466966112762 H2_P_Y = 131.40304996541687 H2_P_Z = 92.28418198233506 # Orientation: H2_DX_X = -0.9698311357487341 H2_DX_Y = 0.11959557297737433 H2_DX_Z = 0.21242520344002003 H2_DY_X = 0.1319249405364289 H2_DY_Y = -0.4752790986271691 H2_DY_Z = 0.8698882620616217 H2_DZ_X = 0.2049960443442238 H2_DZ_Y = 0.871668903501984 H2_DZ_Z = 0.445162829165767 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 17.746314958947124 H3_P_Y = 116.21160688776244 H3_P_Z = 79.77171748720158 # Orientation: H3_DX_X = -0.44667364210866367 H3_DX_Y = -0.6032465109323937 H3_DX_Z = 0.6607392106521814 H3_DY_X = -0.43919857224587133 H3_DY_Y = -0.4955613752546384 H3_DY_Z = -0.7493487422374869 H3_DZ_X = 0.7794788461418136 H3_DZ_Y = -0.6249100498500724 H3_DZ_Z = -0.043590801940439405 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 1263 H4_OUTID2_ORIG = 1210 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 4.581394736567965 H4_P_Y = 121.8963925441417 H4_P_Z = 82.77515544935369 # Orientation: H4_DX_X = -0.23002842779518762 H4_DX_Y = -0.81379102256696 H4_DX_Z = 0.5336956941886513 H4_DY_X = 0.09457048914296262 H4_DY_Y = 0.5271140037839501 H4_DY_Z = 0.8445159854011592 H4_DZ_X = -0.968578001499794 H4_DZ_Y = 0.24473454722264876 H4_DZ_Z = -0.04429059049493844 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 9 H5_INID2 = 2 H5_OUTID2 = 8 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 18.636572059870584 H5_P_Y = 119.97106970967336 H5_P_Z = 108.24679748511204 # Orientation: H5_DX_X = 0.2494907927020691 H5_DX_Y = 0.966303510360234 H5_DX_Z = 0.06333932603348558 H5_DY_X = -0.9651560214069086 H5_DY_Y = 0.24279795457898956 H5_DY_Z = 0.09758589854199329 H5_DZ_X = 0.07891893751744661 H5_DZ_Y = -0.08547911509685946 H5_DZ_Z = 0.9932095056851722 ############# END of Description of junction: j19