#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 168
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 82.28981176464116
H1_P_Y = 14.673686802891675
H1_P_Z = 19.79220384271482
# Orientation:
H1_DX_X = 0.01946360945434833
H1_DX_Y = -0.4675140551053101
H1_DX_Z = -0.8837713370470865
H1_DY_X = 0.024082915778862457
H1_DY_Y = 0.8839015401235013
H1_DY_Z = -0.46705254579639544
H1_DZ_X = 0.9995204755654612
H1_DZ_Y = -0.012193262331837929
H1_DZ_Z = 0.02846301598760803
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 64.41958361282478
H2_P_Y = 12.922365862008775
H2_P_Z = 19.08653493489417
# Orientation:
H2_DX_X = 0.1665181553645425
H2_DX_Y = -0.9454813669081119
H2_DX_Z = 0.2798869213871207
H2_DY_X = 0.049557346266439595
H2_DY_Y = 0.29151601236752
H2_DY_Z = 0.9552813637690072
H2_DZ_X = -0.9847922488347507
H2_DZ_Y = -0.145201237470312
H2_DZ_Z = 0.09539825612699104
#############  END of Description of junction: j1