#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 171
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 84.34089023619217
H1_P_Y = 15.31616284166542
H1_P_Z = 20.167824547085967
# Orientation:
H1_DX_X = 0.016980895189163903
H1_DX_Y = -0.45881192162084616
H1_DX_Z = -0.8883711329040125
H1_DY_X = -0.06172276856142389
H1_DY_Y = 0.8863236568240218
H1_DY_Z = -0.458934282000385
H1_DZ_X = 0.9979488709546587
H1_DZ_Y = 0.06262584077425792
H1_DZ_Z = -0.013268572931217193
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 65.66054262543801
H2_P_Y = 12.652007478048631
H2_P_Z = 18.783279804400273
# Orientation:
H2_DX_X = 0.20007827630631425
H2_DX_Y = -0.9254613557560045
H2_DX_Z = 0.3216985582071388
H2_DY_X = 0.06314329402454177
H2_DY_Y = 0.33983448357348855
H2_DY_Z = 0.9383631749989298
H2_DZ_X = -0.9777431195206816
H2_DZ_Y = -0.16743297995495965
H2_DZ_Z = 0.12643017619769026
#############  END of Description of junction: j1