############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 29:41:42:42:62:65:65:77:92:100:101:105:118:123:130:130:134:143:143:157:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.12698682195611 H1_P_Y = 92.00027069133252 H1_P_Z = 81.04150669248178 # Orientation: H1_DX_X = 0.14234788425692102 H1_DX_Y = -0.9873312227667128 H1_DX_Z = 0.07010090154618354 H1_DY_X = 0.22529119761735927 H1_DY_Y = -0.03664490498394457 H1_DY_Z = -0.9736020887481942 H1_DZ_X = 0.9638365816484225 H1_DZ_Y = 0.15438331350482315 H1_DZ_Z = 0.21722070892886336 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.96640229961821 H2_P_Y = 84.14779620137075 H2_P_Z = 70.8194700671418 # Orientation: H2_DX_X = -0.4114245495174913 H2_DX_Y = 0.4174986033464734 H2_DX_Z = 0.8102004420253479 H2_DY_X = -0.37013932837907504 H2_DY_Y = 0.7357861567149371 H2_DY_Z = -0.5671116373111573 H2_DZ_X = -0.8329025859255168 H2_DZ_Y = -0.5332106973705635 H2_DZ_Z = -0.14818783542578728 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.58047458176431 H3_P_Y = 90.10566707910966 H3_P_Z = 98.20174469599016 # Orientation: H3_DX_X = -0.19904491924096135 H3_DX_Y = 0.9172568581520295 H3_DX_Z = 0.34499416849770626 H3_DY_X = -0.7606954787557711 H3_DY_Y = -0.3665572326982698 H3_DY_Z = 0.535703447587494 H3_DZ_X = 0.617837768936873 H3_DZ_Y = -0.15580645471115417 H3_DZ_Z = 0.7707144996335842 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.00835650352323 H4_P_Y = 102.3843349050412 H4_P_Z = 104.14649719441931 # Orientation: H4_DX_X = -0.9818186442407608 H4_DX_Y = 0.17972795320167734 H4_DX_Z = 0.061073829576798744 H4_DY_X = -0.06476298360781385 H4_DY_Y = -0.6196023780648972 H4_DY_Z = 0.7822395087507061 H4_DZ_X = 0.1784317958645687 H4_DZ_Y = 0.7640620105294289 H4_DZ_Z = 0.6199768852870875 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.159345230000113 H5_P_Y = 97.54281439121588 H5_P_Z = 94.1645181977118 # Orientation: H5_DX_X = -0.15060928913017513 H5_DX_Y = 0.93085484322215 H5_DX_Z = -0.33290554648061743 H5_DY_X = -0.9731078358649601 H5_DY_Y = -0.08022187286856308 H5_DY_Z = 0.2159295970719768 H5_DZ_X = 0.174292804802457 H5_DZ_Y = 0.3564739990003716 H5_DZ_Z = 0.9179043012377548 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.200077805115175 H6_P_Y = 90.48025171249795 H6_P_Z = 72.97287704766819 # Orientation: H6_DX_X = 0.7066452985027851 H6_DX_Y = -0.6603349131592609 H6_DX_Z = 0.25418541375707093 H6_DY_X = -0.7029215381824567 H6_DY_Y = -0.6962448337989855 H6_DY_Z = 0.145411287620405 H6_DZ_X = 0.08095513117222808 H6_DZ_Y = -0.28142660476785863 H6_DZ_Z = -0.9561617712843997 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 31.098318317911243 H7_P_Y = 100.15192662562058 H7_P_Z = 77.66983630618591 # Orientation: H7_DX_X = 0.958852315633365 H7_DX_Y = -0.23382744869448402 H7_DX_Z = -0.16101851148724222 H7_DY_X = -0.2791890774556549 H7_DY_Y = -0.8795500586101355 H7_DY_Z = -0.3852858074577341 H7_DZ_X = -0.05153344383988312 H7_DZ_Y = 0.4143867983369205 H7_DZ_Z = -0.908640680098614 ############# END of Description of junction: j13