############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 139 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.8880005556951 H1_P_Y = 129.2634552779718 H1_P_Z = 14.366627494536234 # Orientation: H1_DX_X = 0.1164907564082327 H1_DX_Y = -0.8018228100982299 H1_DX_Z = 0.5860973339622237 H1_DY_X = 0.6135668789565258 H1_DY_Y = 0.5221394025851396 H1_DY_Z = 0.592373302331918 H1_DZ_X = -0.7810029377147032 H1_DZ_Y = 0.29060389789924557 H1_DZ_Z = 0.5527963330257943 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.80847000721762 H2_P_Y = 119.9057129037671 H2_P_Z = 1.163146200589983 # Orientation: H2_DX_X = -0.9457824209777428 H2_DX_Y = -0.3244282016577671 H2_DX_Z = 0.015554875074732522 H2_DY_X = -0.2218947107212088 H2_DY_Y = 0.6104178203536463 H2_DY_Z = -0.7603636116679025 H2_DZ_X = 0.2371884262004258 H2_DZ_Y = -0.72259008197166 H2_DZ_Z = -0.6493113458986831 ############# END of Description of junction: j4