############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 9:74:77:79:87:138 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 446 S1_NAME_ID3 = 467 S1_NUM_ID5_ORIG = 446 S1_NUM_ID3_ORIG = 467 S1_NAME2_ID5 = 448 S1_NAME2_ID3 = 465 S1_NUM2_ID5_ORIG = 448 S1_NUM2_ID3_ORIG = 465 S1_SQ2 = GACCGAUAGUGAACAAGU S1_SQLEN2 = 18 S1_SQ = GAGACCGAUAGUGAACAAGUAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 25 S2_NAME_ID3 = 36 S2_NUM_ID5_ORIG = 25 S2_NUM_ID3_ORIG = 36 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 34 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 34 S2_SQ2 = UGCUCGGC S2_SQLEN2 = 8 S2_SQ = AUUGCUCGGCUC S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 474 S3_NAME_ID3 = 491 S3_NUM_ID5_ORIG = 474 S3_NUM_ID3_ORIG = 491 S3_NAME2_ID5 = 476 S3_NAME2_ID3 = 489 S3_NUM2_ID5_ORIG = 476 S3_NUM2_ID3_ORIG = 489 S3_SQ2 = AACGCUGCAAAGUA S3_SQLEN2 = 14 S3_SQ = CGAACGCUGCAAAGUACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 501 S4_NAME_ID3 = 518 S4_NUM_ID5_ORIG = 501 S4_NUM_ID3_ORIG = 518 S4_NAME2_ID5 = 503 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 503 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = GGCGAAAUAGAGCA S4_SQLEN2 = 14 S4_SQ = GAGGCGAAAUAGAGCAUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 448 H1_OUTID2_ORIG = 34 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 45.608918975174596 H1_P_Y = 127.15163092847366 H1_P_Z = 36.9396355548243 # Orientation: H1_DX_X = -0.19503703902070413 H1_DX_Y = -0.9335254423703105 H1_DX_Z = 0.30081689091095143 H1_DY_X = -0.5939304916457786 H1_DY_Y = -0.13166301534388936 H1_DY_Z = -0.7936695921376682 H1_DZ_X = 0.780517216019895 H1_DZ_Y = -0.3334592911253935 H1_DZ_Z = -0.5287700602896308 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 476 H2_OUTID2_ORIG = 465 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 63.56808895465354 H2_P_Y = 144.24817085038583 H2_P_Z = 55.79562150746676 # Orientation: H2_DX_X = -0.6444325340495709 H2_DX_Y = 0.41248756319404833 H2_DX_Z = 0.6438638980939118 H2_DY_X = 0.24902000393110768 H2_DY_Y = -0.6829136499939921 H2_DY_Z = 0.6867444825363052 H2_DZ_X = 0.722977002885024 H2_DZ_Y = 0.6028954775598834 H2_DZ_Z = 0.3373741193945534 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 503 H3_OUTID2_ORIG = 489 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 25.657255271245283 H3_P_Y = 171.68620347430902 H3_P_Z = 66.21732443579945 # Orientation: H3_DX_X = -0.7022976905892122 H3_DX_Y = 0.693191685556144 H3_DX_Z = -0.16205937451709929 H3_DY_X = -0.3585633570985607 H3_DY_Y = -0.14778409213573696 H3_DY_Z = 0.9217332483196117 H3_DZ_X = 0.6149880265007326 H3_DZ_Y = 0.7054396850103046 H3_DZ_Z = 0.352341564498559 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 27.82679220625213 H4_P_Y = 141.8956429683112 H4_P_Z = 69.06720900060705 # Orientation: H4_DX_X = -0.7572656670942095 H4_DX_Y = -0.6433550020834957 H4_DX_Z = -0.1124413212946962 H4_DY_X = 0.6016228797489482 H4_DY_Y = -0.7541540147559829 H4_DY_Z = 0.2632520324517884 H4_DZ_X = -0.25416258576537487 H4_DZ_Y = 0.1317044544484247 H4_DZ_Z = 0.958152032130343 ############# END of Description of junction: j1