############# Start of Description of junction: j47 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 38:52:132:133:151:170 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1306 S1_NAME_ID3 = 1309 S1_NUM_ID5_ORIG = 1306 S1_NUM_ID3_ORIG = 1309 S1_NAME2_ID5 = 1307 S1_NAME2_ID3 = 1308 S1_NUM2_ID5_ORIG = 1307 S1_NUM2_ID3_ORIG = 1308 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = UUCG S1_SQLEN = 4 S1_CHAR = 2 ## Properties of strand 2 S2_NAME_ID5 = 1282 S2_NAME_ID3 = 1290 S2_NUM_ID5_ORIG = 1282 S2_NUM_ID3_ORIG = 1290 S2_NAME2_ID5 = 1283 S2_NAME2_ID3 = 1289 S2_NUM2_ID5_ORIG = 1283 S2_NUM2_ID3_ORIG = 1289 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = ACGAUAAAA S2_SQLEN = 9 S2_CHAR = 2 ## Properties of strand 3 S3_NAME_ID5 = 1661 S3_NAME_ID3 = 1666 S3_NUM_ID5_ORIG = 1661 S3_NUM_ID3_ORIG = 1666 S3_NAME2_ID5 = 1662 S3_NAME2_ID3 = 1665 S3_NUM2_ID5_ORIG = 1662 S3_NUM2_ID3_ORIG = 1665 S3_SQ2 = GCGC S3_SQLEN2 = 4 S3_SQ = CGCGCG S3_SQLEN = 6 S3_CHAR = 2 ## Properties of strand 4 S4_NAME_ID5 = 1991 S4_NAME_ID3 = 1994 S4_NUM_ID5_ORIG = 1991 S4_NUM_ID3_ORIG = 1994 S4_NAME2_ID5 = 1992 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1992 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GG S4_SQLEN2 = 2 S4_SQ = CGGU S4_SQLEN = 4 S4_CHAR = 2 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 1307 H1_OUTID2_ORIG = 1289 H1_INSEQ_CHAR = 2 H1_OUTSEQ_CHAR = 2 # Position: H1_P_X = 15.528379242271543 H1_P_Y = 121.41524246689741 H1_P_Z = 163.53136446992153 # Orientation: H1_DX_X = 0.634227320971382 H1_DX_Y = -0.7730526258643948 H1_DX_Z = 0.012055827538205222 H1_DY_X = -0.22270693491558013 H1_DY_Y = -0.16773637653859907 H1_DY_Z = 0.9603468795837387 H1_DZ_X = -0.7403764761754381 H1_DZ_Y = -0.611763145040527 H1_DZ_Z = -0.27854717355623393 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1662 H2_OUTID2_ORIG = 1308 H2_INSEQ_CHAR = 2 H2_OUTSEQ_CHAR = 2 # Position: H2_P_X = 25.49672451309596 H2_P_Y = 130.0539052201513 H2_P_Z = 167.82264228214768 # Orientation: H2_DX_X = 0.5607915195558455 H2_DX_Y = -0.802583152885461 H2_DX_Z = -0.20340391908396782 H2_DY_X = 0.18647544610125166 H2_DY_Y = 0.36179041317083716 H2_DY_Z = -0.9134191835838692 H2_DZ_X = 0.8066844361927288 H2_DZ_Y = 0.4743078954035411 H2_DZ_Z = 0.352551047030488 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1992 H3_OUTID2_ORIG = 1665 H3_INSEQ_CHAR = 2 H3_OUTSEQ_CHAR = 2 # Position: H3_P_X = 26.293358154920053 H3_P_Y = 110.85296431940976 H3_P_Z = 145.1105407042688 # Orientation: H3_DX_X = -0.6195386656904915 H3_DX_Y = 0.40774089686495074 H3_DX_Z = 0.6707601678232038 H3_DY_X = -0.33686937326401534 H3_DY_Y = -0.9099257420102873 H3_DY_Z = 0.2419796879569276 H3_DZ_X = 0.7090069584081355 H3_DZ_Y = -0.07604278434402545 H3_DZ_Z = 0.7010896004634901 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 1283 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = 2 H4_OUTSEQ_CHAR = 2 # Position: H4_P_X = 21.240398916685297 H4_P_Y = 109.54028232235605 H4_P_Z = 137.566394898142 # Orientation: H4_DX_X = -0.718686699603154 H4_DX_Y = 0.6831964844142675 H4_DX_Z = 0.1293521994305138 H4_DY_X = 0.6088725874052301 H4_DY_Y = 0.7081765189688269 H4_DY_Z = -0.35743557501686496 H4_DZ_X = -0.3358029185697795 H4_DZ_Y = -0.17812518537581923 H4_DZ_Z = -0.9249366563256274 ############# END of Description of junction: j47