############# Start of Description of junction: j20 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS3HS9HS5HS8 FINGERPRINT = 64:79:86:89:90:96:112:133:152:157 LOOP_LENGTH_SUM = 27 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 677 S1_NAME_ID3 = 685 S1_NUM_ID5_ORIG = 677 S1_NUM_ID3_ORIG = 685 S1_NAME2_ID5 = 678 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 678 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = GCUAGAC S1_SQLEN2 = 7 S1_SQ = GGCUAGACU S1_SQLEN = 9 S1_CHAR = 2 ## Properties of strand 2 S2_NAME_ID5 = 592 S2_NAME_ID3 = 603 S2_NUM_ID5_ORIG = 592 S2_NUM_ID3_ORIG = 603 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 602 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 602 S2_SQ2 = CGACUUAGAC S2_SQLEN2 = 10 S2_SQ = GCGACUUAGACC S2_SQLEN = 12 S2_CHAR = 2 ## Properties of strand 3 S3_NAME_ID5 = 821 S3_NAME_ID3 = 826 S3_NUM_ID5_ORIG = 821 S3_NUM_ID3_ORIG = 826 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = AGUUCU S3_SQLEN = 6 S3_CHAR = 2 ## Properties of strand 4 S4_NAME_ID5 = 1208 S4_NAME_ID3 = 1214 S4_NUM_ID5_ORIG = 1208 S4_NUM_ID3_ORIG = 1214 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1213 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1213 S4_SQ2 = GCGUU S4_SQLEN2 = 5 S4_SQ = AGCGUUC S4_SQLEN = 7 S4_CHAR = 2 ## Properties of strand 5 S5_NAME_ID5 = 1258 S5_NAME_ID3 = 1270 S5_NUM_ID5_ORIG = 1258 S5_NUM_ID3_ORIG = 1270 S5_NAME2_ID5 = 1259 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1259 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AAGUGCGGAUG S5_SQLEN2 = 11 S5_SQ = GAAGUGCGGAUGC S5_SQLEN = 13 S5_CHAR = 2 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 2 H1_OUTID2 = 11 H1_INID2_ORIG = 678 H1_OUTID2_ORIG = 602 H1_INSEQ_CHAR = 2 H1_OUTSEQ_CHAR = 2 # Position: H1_P_X = 16.73559673480433 H1_P_Y = 137.17183954235284 H1_P_Z = 71.7813634294932 # Orientation: H1_DX_X = 0.6155947341081962 H1_DX_Y = 0.7041570410064537 H1_DX_Z = -0.3538445773772452 H1_DY_X = 0.7092411452646559 H1_DY_Y = -0.6907709238934672 H1_DY_Z = -0.14075698407903303 H1_DZ_X = -0.3435405670396676 H1_DZ_Y = -0.16431187511670942 H1_DZ_Z = -0.9246520894334793 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 2 H2_OUTID2 = 8 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 2 H2_OUTSEQ_CHAR = 2 # Position: H2_P_X = 32.95545099278331 H2_P_Y = 130.92764644543198 H2_P_Z = 92.74702561618004 # Orientation: H2_DX_X = -0.9843641176854554 H2_DX_Y = 0.15075403320963687 H2_DX_Z = 0.09110710885740048 H2_DY_X = -0.0030505926153239216 H2_DY_Y = -0.5317388047847942 H2_DY_Z = 0.8469029090579028 H2_DZ_X = 0.17611921444868983 H2_DZ_Y = 0.833382904166541 H2_DZ_Z = 0.523884488551559 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 2 H3_OUTSEQ_CHAR = 2 # Position: H3_P_X = 17.750188373788102 H3_P_Y = 116.4399654749211 H3_P_Z = 79.07767152935797 # Orientation: H3_DX_X = -0.397723834713684 H3_DX_Y = -0.6603376260482321 H3_DX_Z = 0.6370007621075757 H3_DY_X = -0.42330671909041584 H3_DY_Y = -0.48390270812032554 H3_DY_Z = -0.7659305390482416 H3_DZ_X = 0.8140191477315213 H3_DZ_Y = -0.5742755337804368 H3_DZ_Z = -0.08706571327248014 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 7 H4_INID2 = 2 H4_OUTID2 = 6 H4_INID2_ORIG = 1259 H4_OUTID2_ORIG = 1213 H4_INSEQ_CHAR = 2 H4_OUTSEQ_CHAR = 2 # Position: H4_P_X = -3.895784568476426 H4_P_Y = 123.81324625669677 H4_P_Z = 84.11186707323799 # Orientation: H4_DX_X = 0.18602381695239556 H4_DX_Y = 0.6476705201554864 H4_DX_Z = 0.738862664402518 H4_DY_X = 0.0012574243918423988 H4_DY_Y = 0.7518309022915162 H4_DY_Z = -0.6593547703956091 H4_DZ_X = -0.9825444307563709 H4_DZ_Y = 0.1235847550511977 H4_DZ_Z = 0.13904405743710413 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 13 H5_INID2 = 2 H5_OUTID2 = 12 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 2 H5_OUTSEQ_CHAR = 2 # Position: H5_P_X = 18.909774048653105 H5_P_Y = 120.07098889621928 H5_P_Z = 107.8911635227257 # Orientation: H5_DX_X = 0.21695581426289934 H5_DX_Y = 0.9718352880885277 H5_DX_Z = 0.09201275717748558 H5_DY_X = -0.9747742623974247 H5_DY_Y = 0.21061932744555634 H5_DY_Z = 0.07385550943520514 H5_DZ_X = 0.05239572525575298 H5_DZ_Y = -0.10571504969614409 H5_DZ_Z = 0.9930151138037502 ############# END of Description of junction: j20