#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 10:10:169:170:171:179
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = UGAAGU
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAAG
S4_SQLEN2 = 4
S4_SQ = UGAAGU
S4_SQLEN = 6
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 14.593688539317252
H1_P_Y = -7.725436542184628
H1_P_Z = -31.20431666440168
# Orientation:
H1_DX_X = -0.37098614871178803
H1_DX_Y = -0.44576789942388473
H1_DX_Z = -0.81465345841481
H1_DY_X = 0.3997867467549394
H1_DY_Y = 0.7151334996016185
H1_DY_Z = -0.57337128884053
H1_DZ_X = 0.838176493695153
H1_DZ_Y = -0.5384004621011762
H1_DZ_Z = -0.08709252451352967
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -3.328941096300764
H2_P_Y = 0.7922272757014837
H2_P_Z = -32.44563790359343
# Orientation:
H2_DX_X = 0.3939777161078828
H2_DX_Y = 0.915447774991234
H2_DX_Z = -0.08207880648509303
H2_DY_X = 0.04881040483665622
H2_DY_Y = 0.0683366760686861
H2_DY_Z = 0.9964675825552831
H2_DZ_X = 0.9178230241120007
H2_DZ_Y = -0.3965923221237202
H2_DZ_Z = -0.017760248940192014
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = -17.620925222227648
H3_P_Y = 7.576913683117401
H3_P_Z = -31.00529947895921
# Orientation:
H3_DX_X = 0.37396187558287153
H3_DX_Y = 0.48401749466692845
H3_DX_Z = -0.7911255149891794
H3_DY_X = -0.399649671497194
H3_DY_Y = -0.6856567658492478
H3_DY_Z = -0.6084035991982049
H3_DZ_X = -0.8369185478185592
H3_DZ_Y = 0.5436928032460058
H3_DZ_Z = -0.06297205742053436
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 0.3639397697446656
H4_P_Y = -0.7352298456729998
H4_P_Z = -32.55061567532657
# Orientation:
H4_DX_X = -0.4093639273797745
H4_DX_Y = -0.9091128403046735
H4_DX_Z = -0.0770390716024778
H4_DY_X = -0.027908500473659725
H4_DY_Y = -0.07192148318855818
H4_DY_Z = 0.9970197670343701
H4_DZ_X = -0.9119442365416415
H4_DZ_Y = 0.4102939724747676
H4_DZ_Z = 0.004070084686794928
#############  END of Description of junction: j1