#############  Start of Description of junction: j2
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 9:9:169:171:172:178
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = UGAAGU
S1_SQLEN = 6
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = D
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAAG
S4_SQLEN2 = 4
S4_SQ = UGAAGU
S4_SQLEN = 6
S4_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = -3.3882593292685925
H1_P_Y = -20.908022382271024
H1_P_Z = -10.991610646626771
# Orientation:
H1_DX_X = 0.35186613119193133
H1_DX_Y = -0.46223018880017364
H1_DX_Z = 0.8139615950901984
H1_DY_X = -0.4055014172009077
H1_DY_Y = 0.7084685136412219
H1_DY_Z = 0.5776166253035449
H1_DZ_X = -0.8436580032027656
H1_DZ_Y = -0.5333063076138842
H1_DZ_Z = 0.06185107833472259
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 14.517055666915553
H2_P_Y = -12.279665205827165
H2_P_Z = -9.380425844846936
# Orientation:
H2_DX_X = -0.39591934044875643
H2_DX_Y = 0.9151169128950709
H2_DX_Z = 0.0762162160699269
H2_DY_X = -0.036011151157447685
H2_DY_Y = 0.06746189956992765
H2_DY_Z = -0.9970717572465553
H2_DZ_X = -0.9175789191404391
H2_DZ_Y = -0.3975046261866808
H2_DZ_Z = 0.006244942693856004
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = D
H3_OUTSEQ_CHAR = D
# Position:
H3_P_X = 28.82712403311905
H3_P_Y = -5.403856370608249
H3_P_Z = -11.184034008819786
# Orientation:
H3_DX_X = -0.36914674646553536
H3_DX_Y = 0.4768688475104135
H3_DX_Z = 0.7977009350928466
H3_DY_X = 0.3721809359785624
H3_DY_Y = -0.7106387247806323
H3_DY_Z = 0.5970543976358247
H3_DZ_X = 0.8515938177723186
H3_DZ_Y = 0.5172897690040337
H3_DZ_Z = 0.08484847915974214
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = D
# Position:
H4_P_X = 10.729976184107118
H4_P_Y = -13.784441222789695
H4_P_Z = -9.503921045111673
# Orientation:
H4_DX_X = 0.38662075046413946
H4_DX_Y = -0.9174316328614776
H4_DX_Z = 0.09404038672650294
H4_DY_X = 0.058212663568827594
H4_DY_Y = -0.07748963616496773
H4_DY_Z = -0.995292239539344
H4_DZ_X = 0.9203997398471859
H4_DZ_Y = 0.39027497397622746
H4_DZ_Z = 0.02344703770387291
#############  END of Description of junction: j2