############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 177 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 12 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 12 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 10 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 10 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = G ## Properties of strand 2 S2_NAME_ID5 = 24 S2_NAME_ID3 = 30 S2_NUM_ID5_ORIG = 24 S2_NUM_ID3_ORIG = 30 S2_NAME2_ID5 = 26 S2_NAME2_ID3 = 28 S2_NUM2_ID5_ORIG = 26 S2_NUM2_ID3_ORIG = 28 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = H ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 28 H1_INSEQ_CHAR = G H1_OUTSEQ_CHAR = H # Position: H1_P_X = 17.627787429248077 H1_P_Y = 50.843102116137416 H1_P_Z = 1.5792376531605141 # Orientation: H1_DX_X = -0.971030656729674 H1_DX_Y = -0.023109525447374324 H1_DX_Z = -0.23783484506004537 H1_DY_X = -0.23674666148158252 H1_DY_Y = -0.04195993213548377 H1_DY_Z = 0.970664917658258 H1_DZ_X = -0.032411139573667924 H1_DZ_Y = 0.9988519980101103 H1_DZ_Z = 0.03527327745976305 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 26 H2_OUTID2_ORIG = 10 H2_INSEQ_CHAR = H H2_OUTSEQ_CHAR = G # Position: H2_P_X = 16.81276552433702 H2_P_Y = 30.427332683478316 H2_P_Z = 0.18526634450772472 # Orientation: H2_DX_X = 0.5149817927672835 H2_DX_Y = 0.0024251893045672546 H2_DX_Z = -0.8571976852366276 H2_DY_X = 0.8568005032288717 H2_DY_Y = -0.032025462369976054 H2_DY_Z = 0.514652569629982 H2_DZ_X = -0.02620402230474639 H2_DZ_Y = -0.9994841110377024 H2_DZ_Z = -0.018570433442072265 ############# END of Description of junction: j4