#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 155
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = GUGAAGUC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  24
S2_NAME_ID3 = 30
S2_NUM_ID5_ORIG =  24
S2_NUM_ID3_ORIG = 30
S2_NAME2_ID5 =  26
S2_NAME2_ID3 = 28
S2_NUM2_ID5_ORIG =  26
S2_NUM2_ID3_ORIG = 28
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = GUCACAC
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 28
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 27.107307513174494
H1_P_Y = 25.6705501160844
H1_P_Z = 29.841448736254367
# Orientation:
H1_DX_X = -0.7984444463211418
H1_DX_Y = -0.5649079197930078
H1_DX_Z = -0.20824386736242673
H1_DY_X = -0.5940620537726886
H1_DY_Y = 0.7954205285421452
H1_DY_Z = 0.11998524509752784
H1_DZ_X = 0.09786083182918048
H1_DZ_Y = 0.2195113321194988
H1_DZ_Z = -0.9706894625289948
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 26
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 29.38091164584332
H2_P_Y = 20.98692004666713
H2_P_Z = 50.206469408492595
# Orientation:
H2_DX_X = 0.8284192727311108
H2_DX_Y = -0.42009319765783104
H2_DX_Z = -0.370463512169934
H2_DY_X = 0.4509893758227719
H2_DY_Y = 0.8925220521067523
H2_DY_Z = -0.003601305060463744
H2_DZ_X = 0.3321597378711729
H2_DZ_Y = -0.16409171759955754
H2_DZ_Z = 0.9288400383018498
#############  END of Description of junction: j1