#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 81:84:87:106:164:168
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 27
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 27
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CG
S1_SQLEN2 = 2
S1_SQ = GCGC
S1_SQLEN = 4
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUGG
S2_SQLEN2 = 4
S2_SQ = GGUGGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  43
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  43
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = UGCGUG
S3_SQLEN2 = 6
S3_SQ = GUGCGUGC
S3_SQLEN = 8
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = GCCC
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 24.98395160394962
H1_P_Y = 25.356783657513716
H1_P_Z = 14.070190707823718
# Orientation:
H1_DX_X = -0.752339666572734
H1_DX_Y = -0.6473177269415018
H1_DX_Z = 0.12233064411061534
H1_DY_X = 0.16788452855910307
H1_DY_Y = -0.36795696883326556
H1_DY_Z = -0.9145613452128405
H1_DZ_X = 0.637024184134102
H1_DZ_Y = -0.6675233550028956
H1_DZ_Z = 0.38550325466065694
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 17.38894358847709
H2_P_Y = 33.66126159651434
H2_P_Z = 5.85159291771868
# Orientation:
H2_DX_X = -0.5385634694171166
H2_DX_Y = -0.38572832035794846
H2_DX_Z = 0.7491081712831811
H2_DY_X = 0.21258337501441815
H2_DY_Y = 0.7980935507122737
H2_DY_Z = 0.5637863008081725
H2_DZ_X = -0.8153267431385274
H2_DZ_Y = 0.46288264947534685
H2_DZ_Z = -0.34782460341068866
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 36.23229336390308
H3_P_Y = 12.38104717148914
H3_P_Z = 29.78294859835737
# Orientation:
H3_DX_X = -0.9236162770229512
H3_DX_Y = 0.2313824912929654
H3_DX_Z = 0.30560614447573897
H3_DY_X = 0.20556415236080738
H3_DY_Y = -0.3739401445753803
H3_DY_Z = 0.9043849553918513
H3_DZ_X = 0.32353724991482835
H3_DZ_Y = 0.8981263335400005
H3_DZ_Z = 0.29781325846836637
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 30.457817300479263
H4_P_Y = 1.8652103106188136
H4_P_Z = 25.132361301651574
# Orientation:
H4_DX_X = -0.8307556012550954
H4_DX_Y = 0.41629173412192455
H4_DX_Z = 0.36952174913670177
H4_DY_X = -0.2235441652214405
H4_DY_Y = 0.35845040595008304
H4_DY_Z = -0.9063891618227053
H4_DZ_X = -0.509777536949926
H4_DZ_Y = -0.8355923040430562
H4_DZ_Z = -0.204725094322324
#############  END of Description of junction: j1