#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS2HS5
FINGERPRINT = 78:90:95:96:168:174
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CGG
S1_SQLEN2 = 3
S1_SQ = GCGGG
S1_SQLEN = 5
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUAG
S2_SQLEN2 = 4
S2_SQ = CGUAGC
S2_SQLEN = 6
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  42
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  42
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  43
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  43
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = CAGGUCG
S3_SQLEN2 = 7
S3_SQ = CCAGGUCGG
S3_SQLEN = 9
S3_CHAR = C
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = CCCG
S4_SQLEN = 4
S4_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 57.31639349464315
H1_P_Y = 1.4498766159151995
H1_P_Z = 49.50326616155044
# Orientation:
H1_DX_X = -0.7071088816129176
H1_DX_Y = 0.5722140829064455
H1_DX_Z = -0.4154131351650605
H1_DY_X = -0.7051752329342946
H1_DY_Y = -0.5272860669920543
H1_DY_Z = 0.4740224619278237
H1_DZ_X = 0.05220077011105673
H1_DZ_Y = 0.6281245472671668
H1_DZ_Z = 0.776359860322664
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 53.892611940457954
H2_P_Y = -11.319445569471284
H2_P_Z = 41.226574817884334
# Orientation:
H2_DX_X = 0.48362152205167064
H2_DX_Y = 0.596943721525319
H2_DX_Z = -0.6401315620557426
H2_DY_X = 0.8363366531113954
H2_DY_Y = -0.5308742445325034
H2_DY_Z = 0.13679743840614833
H2_DZ_X = -0.2581689874304587
H2_DZ_Y = -0.6015236735354179
H2_DZ_Z = -0.7559881243151807
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = C
H3_OUTSEQ_CHAR = C
# Position:
H3_P_X = 61.833531302491785
H3_P_Y = 15.828769172338617
H3_P_Z = 64.00510415103486
# Orientation:
H3_DX_X = 0.22916231081999427
H3_DX_Y = 0.24373257344474197
H3_DX_Z = -0.9423794713074187
H3_DY_X = 0.34631381797868244
H3_DY_Y = 0.8843817036425285
H3_DY_Z = 0.3129468672783986
H3_DZ_X = 0.9096985076258335
H3_DZ_Y = -0.39807465996259594
H3_DZ_Z = 0.11825899677822349
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = C
# Position:
H4_P_X = 50.49303915489965
H4_P_Y = 21.20110506514272
H4_P_Z = 63.010862485868444
# Orientation:
H4_DX_X = 0.13082966783868955
H4_DX_Y = 0.23225608977830348
H4_DX_Z = -0.9638157016640179
H4_DY_X = -0.4052620463554959
H4_DY_Y = -0.8747091011568564
H4_DY_Z = -0.2657943982425479
H4_DZ_X = -0.9047907337041963
H4_DZ_Y = 0.4253717164013793
H4_DZ_Z = -0.020313322937752787
#############  END of Description of junction: j1