#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS1
FINGERPRINT = 165
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  5
S1_NAME2_ID3 = 7
S1_NUM2_ID5_ORIG =  5
S1_NUM2_ID3_ORIG = 7
S1_SQ2 = AGA
S1_SQLEN2 = 3
S1_SQ = CGAGAGG
S1_SQLEN = 7
S1_CHAR = R
## Properties of strand 2
S2_NAME_ID5 =  20
S2_NAME_ID3 = 26
S2_NUM_ID5_ORIG =  20
S2_NUM_ID3_ORIG = 26
S2_NAME2_ID5 =  22
S2_NAME2_ID3 = 24
S2_NUM2_ID5_ORIG =  22
S2_NUM2_ID3_ORIG = 24
S2_SQ2 = TCT
S2_SQLEN2 = 3
S2_SQ = CCTCTCG
S2_SQLEN = 7
S2_CHAR = T
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 5
H1_OUTID2_ORIG = 24
H1_INSEQ_CHAR = R
H1_OUTSEQ_CHAR = T
# Position:
H1_P_X = 17.180582253671886
H1_P_Y = 17.67636085303015
H1_P_Z = 28.66349085079046
# Orientation:
H1_DX_X = -0.28863422463994937
H1_DX_Y = 0.8271866619169899
H1_DX_Z = 0.48213329143829853
H1_DY_X = 0.9442235744728826
H1_DY_Y = 0.16254603311760363
H1_DY_Z = 0.286392437971724
H1_DZ_X = 0.1585311508068692
H1_DZ_Y = 0.5379042790909558
H1_DZ_Z = -0.8279654949087458
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 22
H2_OUTID2_ORIG = 7
H2_INSEQ_CHAR = T
H2_OUTSEQ_CHAR = R
# Position:
H2_P_X = 10.80017204356808
H2_P_Y = 6.4097643300186995
H2_P_Z = 47.011834448176884
# Orientation:
H2_DX_X = -0.8972687440165288
H2_DX_Y = -0.010417949306034124
H2_DX_Z = -0.4413618326761579
H2_DY_X = 0.20100500741710903
H2_DY_Y = -0.8997337169047173
H2_DY_Z = -0.38739672902345035
H2_DZ_X = -0.39307224272930874
H2_DZ_Y = -0.43631491493768415
H2_DZ_Z = 0.8093970020939523
#############  END of Description of junction: j1