############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 18:64:73:99:109:171 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 358.8404747233919 H1_P_Y = 110.90448779730231 H1_P_Z = 10.502705179941962 # Orientation: H1_DX_X = -0.4200406336521496 H1_DX_Y = 0.20423231566488198 H1_DX_Z = 0.8842256653814324 H1_DY_X = -0.8472914497734223 H1_DY_Y = -0.4372579881991072 H1_DY_Z = -0.30150066483653504 H1_DZ_X = 0.3250585566046311 H1_DZ_Y = -0.8758393762524292 H1_DZ_Z = 0.35671041726291186 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 374.14903107258846 H2_P_Y = 115.61473808745735 H2_P_Z = -10.552192779707031 # Orientation: H2_DX_X = -0.9201141224341995 H2_DX_Y = -0.37880010808351017 H2_DX_Z = -0.09950115483275823 H2_DY_X = 0.31244284297719105 H2_DY_Y = -0.5567563863976375 H2_DY_Z = -0.7696764229712123 H2_DZ_X = 0.23615560880375597 H2_DZ_Y = -0.7392785701759124 H2_DZ_Z = 0.6306327965695928 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 354.8538788209939 H3_P_Y = 120.52877268577707 H3_P_Z = 29.41910159407446 # Orientation: H3_DX_X = -0.26874621519584707 H3_DX_Y = -0.46775973689676675 H3_DX_Z = -0.8420073042178231 H3_DY_X = 0.02483647103002795 H3_DY_Y = -0.8772415738735049 H3_DY_Z = 0.47940626901902306 H3_DZ_X = -0.9628907630280423 H3_DZ_Y = 0.10792613032172937 H3_DZ_Z = 0.24737285394539654 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 370.9099871456479 H4_P_Y = 117.26477395082101 H4_P_Z = 26.478037065121033 # Orientation: H4_DX_X = 0.06781721375972438 H4_DX_Y = 0.7497178964699316 H4_DX_Z = -0.6582734243690567 H4_DY_X = 0.21965404923554388 H4_DY_Y = 0.6323838283571632 H4_DY_Z = 0.7428612200719442 H4_DZ_X = 0.9732178194897187 H4_DZ_Y = -0.19497120132226087 H4_DZ_Z = -0.12179206247805752 ############# END of Description of junction: j3