#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 161
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 43
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 43
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 41
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 41
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 41
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 21.77462893517258
H1_P_Y = 21.304961678252788
H1_P_Z = 40.8929960122529
# Orientation:
H1_DX_X = 0.6399438153974302
H1_DX_Y = -0.6236015115935629
H1_DX_Z = -0.4489911668093285
H1_DY_X = -0.3352791900784027
H1_DY_Y = 0.29915230266530557
H1_DY_Z = -0.8933620567890799
H1_DZ_X = 0.6914186704413972
H1_DZ_Y = 0.7222389179130886
H1_DZ_Z = -0.017639943786193157
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 38
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 8.411112791576379
H2_P_Y = 5.191804598113501
H2_P_Z = 36.37008517104489
# Orientation:
H2_DX_X = -0.1429661155955415
H2_DX_Y = -0.2338276790108802
H2_DX_Z = 0.9617095748301097
H2_DY_X = -0.8250373163946465
H2_DY_Y = 0.564887100715076
H2_DY_Z = 0.014696598315111942
H2_DZ_X = -0.5466938049290864
H2_DZ_Y = -0.7913451711952888
H2_DZ_Z = -0.27367627532918704
#############  END of Description of junction: j1