#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 172
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1489
S1_NAME_ID3 = 1496
S1_NUM_ID5_ORIG =  1489
S1_NUM_ID3_ORIG = 1496
S1_NAME2_ID5 =  1491
S1_NAME2_ID3 = 1494
S1_NUM2_ID5_ORIG =  1491
S1_NUM2_ID3_ORIG = 1494
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = GUGAAGUC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1405
S2_NAME_ID3 = 1411
S2_NUM_ID5_ORIG =  1405
S2_NUM_ID3_ORIG = 1411
S2_NAME2_ID5 =  1407
S2_NAME2_ID3 = 1409
S2_NUM2_ID5_ORIG =  1407
S2_NUM2_ID3_ORIG = 1409
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = GUCACAC
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 1491
H1_OUTID2_ORIG = 1409
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 10.59603276259229
H1_P_Y = 2.855859935008872
H1_P_Z = 13.744483693380978
# Orientation:
H1_DX_X = 0.9642085788144872
H1_DX_Y = -0.24525225921087834
H1_DX_Z = 0.10076281999083392
H1_DY_X = 0.15718952299999955
H1_DY_Y = 0.8347828388066496
H1_DY_Z = 0.5276637811077656
H1_DZ_X = -0.2135258073385451
H1_DZ_Y = -0.49293908486330373
H1_DZ_Z = 0.8434558602645144
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 1407
H2_OUTID2_ORIG = 1494
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 15.55984453384245
H2_P_Y = 12.816486575457194
H2_P_Z = -3.265390252713111
# Orientation:
H2_DX_X = -0.5436650363259545
H2_DX_Y = -0.7115111215703873
H2_DX_Z = -0.4451744064502723
H2_DY_X = -0.835147564818719
H2_DY_Y = 0.5113166569262102
H2_DY_Z = 0.20269144364567548
H2_DZ_X = 0.08340787285420781
H2_DZ_Y = 0.4819825725391489
H2_DZ_Z = -0.8722017693827961
#############  END of Description of junction: j1