############# Start of Description of junction: j78 # Number of strands: NUM_STRANDS = 5 LILLEY = HS4HS8HS6HS9HS6 FINGERPRINT = 16:21:45:54:101:121:146:150:163:166 LOOP_LENGTH_SUM = 33 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2445 S1_NAME_ID3 = 2454 S1_NUM_ID5_ORIG = 2445 S1_NUM_ID3_ORIG = 2454 S1_NAME2_ID5 = 2446 S1_NAME2_ID3 = 2453 S1_NUM2_ID5_ORIG = 2446 S1_NUM2_ID3_ORIG = 2453 S1_SQ2 = GGAUAACA S1_SQLEN2 = 8 S1_SQ = GGGAUAACAG S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2053 S2_NAME_ID3 = 2065 S2_NUM_ID5_ORIG = 2053 S2_NUM_ID3_ORIG = 2065 S2_NAME2_ID5 = 2054 S2_NAME2_ID3 = 2064 S2_NUM2_ID5_ORIG = 2054 S2_NUM2_ID3_ORIG = 2064 S2_SQ2 = ACGGAAAGACC S2_SQLEN2 = 11 S2_SQ = GACGGAAAGACCC S2_SQLEN = 13 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 2498 S3_NAME_ID3 = 2507 S3_NUM_ID5_ORIG = 2498 S3_NUM_ID3_ORIG = 2507 S3_NAME2_ID5 = 2499 S3_NAME2_ID3 = 2506 S3_NUM2_ID5_ORIG = 2499 S3_NUM2_ID3_ORIG = 2506 S3_SQ2 = CUCGAUGU S3_SQLEN2 = 8 S3_SQ = CCUCGAUGUC S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2582 S4_NAME_ID3 = 2589 S4_NUM_ID5_ORIG = 2582 S4_NUM_ID3_ORIG = 2589 S4_NAME2_ID5 = 2583 S4_NAME2_ID3 = 2588 S4_NUM2_ID5_ORIG = 2583 S4_NUM2_ID3_ORIG = 2588 S4_SQ2 = GUUUAG S4_SQLEN2 = 6 S4_SQ = GGUUUAGA S4_SQLEN = 8 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2605 S5_NAME_ID3 = 2616 S5_NUM_ID5_ORIG = 2605 S5_NUM_ID3_ORIG = 2616 S5_NAME2_ID5 = 2606 S5_NAME2_ID3 = 2615 S5_NUM2_ID5_ORIG = 2606 S5_NUM2_ID3_ORIG = 2615 S5_SQ2 = CGGUCCCUAU S5_SQLEN2 = 10 S5_SQ = UCGGUCCCUAUC S5_SQLEN = 12 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 2446 H1_OUTID2_ORIG = 2064 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 11.324181358019107 H1_P_Y = -25.922776118148402 H1_P_Z = -7.161760775922627 # Orientation: H1_DX_X = -0.7878197706347834 H1_DX_Y = -0.2713121425521834 H1_DX_Z = -0.5529283229322779 H1_DY_X = 0.43753297058603735 H1_DY_Y = -0.878377908452638 H1_DY_Z = -0.19239841369545285 H1_DZ_X = -0.4334799979781234 H1_DZ_Y = -0.39349964580176433 H1_DZ_Z = 0.8107114900547376 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 2 H2_OUTID2 = 9 H2_INID2_ORIG = 2499 H2_OUTID2_ORIG = 2453 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 0.3596002083166887 H2_P_Y = -23.39158153357452 H2_P_Z = -32.96914278449603 # Orientation: H2_DX_X = 0.7806720154863658 H2_DX_Y = 0.5186417536119841 H2_DX_Z = -0.3486573327018192 H2_DY_X = 0.3118177235912838 H2_DY_Y = -0.8067605495802503 H2_DY_Z = -0.5019034995846567 H2_DZ_X = -0.5415910925142764 H2_DZ_Y = 0.2831044808039245 H2_DZ_Z = -0.7915370752263868 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2583 H3_OUTID2_ORIG = 2506 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 15.106461114488283 H3_P_Y = 1.0888562578531857 H3_P_Z = -20.261780385390814 # Orientation: H3_DX_X = -0.7238899493106281 H3_DX_Y = -0.5383118070379311 H3_DX_Z = -0.43151331345696775 H3_DY_X = -0.6590991306765197 H3_DY_Y = 0.7244341585947784 H3_DY_Z = 0.20194921589977 H3_DZ_X = 0.20389133681574556 H3_DZ_Y = 0.43059905743583915 H3_DZ_Z = -0.879211450395669 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 2 H4_OUTID2 = 7 H4_INID2_ORIG = 2606 H4_OUTID2_ORIG = 2588 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = -0.6851572329856257 H4_P_Y = -6.80806369531379 H4_P_Z = -1.296926429787213 # Orientation: H4_DX_X = 0.3392369825852901 H4_DX_Y = 0.537930310858119 H4_DX_Z = 0.7717183749960315 H4_DY_X = -0.6161160014225404 H4_DY_Y = 0.7469783284743023 H4_DY_Z = -0.24984885347113006 H4_DZ_X = -0.7108581732227097 H4_DZ_Y = -0.39071006827291477 H4_DZ_Z = 0.5848301463781138 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 2054 H5_OUTID2_ORIG = 2615 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 32.83908078375661 H5_P_Y = -3.9448993488243262 H5_P_Z = -30.851877720496738 # Orientation: H5_DX_X = 0.6286551241713809 H5_DX_Y = -0.6872090839434932 H5_DX_Z = -0.3640555037334501 H5_DY_X = -0.7235333784872395 H5_DY_Y = -0.3452097844517308 H5_DY_Z = -0.5977705704813765 H5_DZ_X = 0.2851178441765967 H5_DZ_Y = 0.6391978407851004 H5_DZ_Z = -0.7142366101424322 ############# END of Description of junction: j78