#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS1
FINGERPRINT = 165
LOOP_LENGTH_SUM = 2
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  939
S1_NAME_ID3 = 943
S1_NUM_ID5_ORIG =  939
S1_NUM_ID3_ORIG = 943
S1_NAME2_ID5 =  940
S1_NAME2_ID3 = 942
S1_NUM2_ID5_ORIG =  940
S1_NUM2_ID3_ORIG = 942
S1_SQ2 = CGG
S1_SQLEN2 = 3
S1_SQ = GCGGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1340
S2_NAME_ID3 = 1344
S2_NUM_ID5_ORIG =  1340
S2_NUM_ID3_ORIG = 1344
S2_NAME2_ID5 =  1341
S2_NAME2_ID3 = 1343
S2_NUM2_ID5_ORIG =  1341
S2_NUM2_ID3_ORIG = 1343
S2_SQ2 = UCG
S2_SQLEN2 = 3
S2_SQ = AUCGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 940
H1_OUTID2_ORIG = 1343
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -86.55016714036432
H1_P_Y = -6.185210111047631
H1_P_Z = 26.839869146881608
# Orientation:
H1_DX_X = -0.9152409634122591
H1_DX_Y = 0.011045431001424078
H1_DX_Z = -0.40275548083943136
H1_DY_X = -0.29726002808186536
H1_DY_Y = -0.6932900486771079
H1_DY_Z = 0.6564947708169875
H1_DZ_X = -0.27197509922228846
H1_DZ_Y = 0.7205740120621078
H1_DZ_Z = 0.6378108172050254
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 1341
H2_OUTID2_ORIG = 942
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -80.96785300761934
H2_P_Y = -19.11761732693956
H2_P_Z = 14.874095607588442
# Orientation:
H2_DX_X = -0.6528931769753967
H2_DX_Y = 0.5429913768233234
H2_DX_Z = -0.5281011874200736
H2_DY_X = 0.7308612006231101
H2_DY_Y = 0.6347156245869598
H2_DY_Z = -0.2509541418843817
H2_DZ_X = 0.1989281399971361
H2_DZ_Y = -0.5498149148583558
H2_DZ_Z = -0.8112528302055892
#############  END of Description of junction: j41