############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS5HS9 FINGERPRINT = 57:81:124 LOOP_LENGTH_SUM = 17 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1342 S1_NAME_ID3 = 1350 S1_NUM_ID5_ORIG = 1342 S1_NUM_ID3_ORIG = 1350 S1_NAME2_ID5 = 1344 S1_NAME2_ID3 = 1348 S1_NUM2_ID5_ORIG = 1344 S1_NUM2_ID3_ORIG = 1348 S1_SQ2 = CUAGU S1_SQLEN2 = 5 S1_SQ = CGCUAGUAA S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 931 S2_NAME_ID3 = 941 S2_NUM_ID5_ORIG = 931 S2_NUM_ID3_ORIG = 941 S2_NAME2_ID5 = 933 S2_NAME2_ID3 = 939 S2_NUM2_ID5_ORIG = 933 S2_NUM2_ID3_ORIG = 939 S2_SQ2 = GCACAAG S2_SQLEN2 = 7 S2_SQ = CCGCACAAGCG S2_SQLEN = 11 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1372 S3_NAME_ID3 = 1386 S3_NUM_ID5_ORIG = 1372 S3_NUM_ID3_ORIG = 1386 S3_NAME2_ID5 = 1374 S3_NAME2_ID3 = 1384 S3_NUM2_ID5_ORIG = 1374 S3_NUM2_ID3_ORIG = 1384 S3_SQ2 = AAUACGUUCCC S3_SQLEN2 = 11 S3_SQ = UGAAUACGUUCCCGG S3_SQLEN = 15 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1344 H1_OUTID2_ORIG = 939 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 270.6074514317599 H1_P_Y = 164.1200646110329 H1_P_Z = 147.07046140643934 # Orientation: H1_DX_X = -0.16170382384740378 H1_DX_Y = 0.48644403736642516 H1_DX_Z = 0.8586175352645853 H1_DY_X = -0.9207453133989247 H1_DY_Y = -0.38743197803822227 H1_DY_Z = 0.04609262682177473 H1_DZ_X = 0.3550773735498751 H1_DZ_Y = -0.7831147175887168 H1_DZ_Z = 0.5105402999654984 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 1374 H2_OUTID2_ORIG = 1348 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 258.7626243289562 H2_P_Y = 178.0005375058553 H2_P_Z = 162.08985729323558 # Orientation: H2_DX_X = 0.6246818479751823 H2_DX_Y = -0.6466854879734001 H2_DX_Z = -0.437687637996504 H2_DY_X = 0.5283573970099837 H2_DY_Y = -0.0626842308381299 H2_DY_Z = 0.8467048767008976 H2_DZ_X = -0.5749878692939205 H2_DZ_Y = -0.7601766681823676 H2_DZ_Z = 0.3025233599508965 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 15 H3_INID2 = 3 H3_OUTID2 = 13 H3_INID2_ORIG = 933 H3_OUTID2_ORIG = 1384 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 260.47925309677356 H3_P_Y = 176.68589627261923 H3_P_Z = 125.0967613703995 # Orientation: H3_DX_X = -0.7898322946664393 H3_DX_Y = -0.14555377162974992 H3_DX_Z = 0.5958011798128098 H3_DY_X = -0.16024915578771015 H3_DY_Y = 0.9866620530785326 H3_DY_Z = 0.028604214447383924 H3_DZ_X = -0.5920178665980416 H3_DZ_Y = -0.07288410374823684 H3_DZ_Z = -0.8026224224687155 ############# END of Description of junction: j28