############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 21:64:72:99:110:170 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 222.57574176694902 H1_P_Y = 149.70856125457823 H1_P_Z = 45.999245283823726 # Orientation: H1_DX_X = -0.6731112391279908 H1_DX_Y = 0.20854452238998533 H1_DX_Z = 0.7095283235648253 H1_DY_X = 0.26508235958590376 H1_DY_Y = 0.963702094268541 H1_DY_Z = -0.03177445733291506 H1_DZ_X = -0.6904003203909497 H1_DZ_Y = 0.16669569785563 H1_DZ_Z = -0.7039601848972055 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 240.82124671035757 H2_P_Y = 135.04189174244445 H2_P_Z = 33.47718335545973 # Orientation: H2_DX_X = 0.10667353553830594 H2_DX_Y = 0.9873124069096093 H2_DX_Z = 0.11762214067978505 H2_DY_X = 0.42513663145319924 H2_DY_Y = 0.061647342407951555 H2_DY_Z = -0.9030273804102862 H2_DZ_X = -0.8988212288394095 H2_DZ_Y = 0.1463346040291924 H2_DZ_Z = -0.41316653089433686 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 210.4918330963185 H3_P_Y = 147.3370223029785 H3_P_Z = 63.38923045268222 # Orientation: H3_DX_X = 0.6225605434899819 H3_DX_Y = 0.5251086414046142 H3_DX_Z = -0.5802407124734259 H3_DY_X = -0.7825655216712732 H3_DY_Y = 0.4148056926515835 H3_DY_Z = -0.4642493313244671 H3_DZ_X = -0.0030941850025953954 H3_DZ_Y = 0.7430996918758979 H3_DZ_Z = 0.6691735753547974 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 208.38675981127847 H4_P_Y = 135.01693452036446 H4_P_Z = 51.763239565185415 # Orientation: H4_DX_X = 0.8668781071130525 H4_DX_Y = -0.421314422253829 H4_DX_Z = 0.26648922118727114 H4_DY_X = -0.4701939638983106 H4_DY_Y = -0.5133708523852647 H4_DY_Z = 0.7178913596323966 H4_DZ_X = -0.1656501847921561 H4_DZ_Y = -0.7476259261971734 H4_DZ_Z = -0.6431294510097985 ############# END of Description of junction: j4