#############  Start of Description of junction: j8
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 5:49:53:81:94:96:100:105:133:137
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  397
S1_NAME_ID3 = 404
S1_NUM_ID5_ORIG =  397
S1_NUM_ID3_ORIG = 404
S1_NAME2_ID5 =  399
S1_NAME2_ID3 = 402
S1_NUM2_ID5_ORIG =  399
S1_NUM2_ID3_ORIG = 402
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = CGCUUGGA
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 42
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 42
S2_NAME2_ID5 =  38
S2_NAME2_ID3 = 40
S2_NUM2_ID5_ORIG =  38
S2_NUM2_ID3_ORIG = 40
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = GCUGGCG
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  430
S3_NAME_ID3 = 437
S3_NUM_ID5_ORIG =  430
S3_NUM_ID3_ORIG = 437
S3_NAME2_ID5 =  432
S3_NAME2_ID3 = 435
S3_NUM2_ID5_ORIG =  432
S3_NUM2_ID3_ORIG = 435
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = UCCUGAAC
S3_SQLEN = 8
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  477
S4_NAME_ID3 = 486
S4_NUM_ID5_ORIG =  477
S4_NUM_ID3_ORIG = 486
S4_NAME2_ID5 =  479
S4_NAME2_ID3 = 484
S4_NUM2_ID5_ORIG =  479
S4_NUM2_ID3_ORIG = 484
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GGUAAUAGCG
S4_SQLEN = 10
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  527
S5_NAME_ID3 = 533
S5_NUM_ID5_ORIG =  527
S5_NUM_ID3_ORIG = 533
S5_NAME2_ID5 =  529
S5_NAME2_ID3 = 531
S5_NUM2_ID5_ORIG =  529
S5_NUM2_ID3_ORIG = 531
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = CGCGAGC
S5_SQLEN = 7
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 399
H1_OUTID2_ORIG = 40
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 348.6966965760064
H1_P_Y = 127.93031297745529
H1_P_Z = 53.25884633307137
# Orientation:
H1_DX_X = 0.2543551233372341
H1_DX_Y = -0.5257803190969383
H1_DX_Z = 0.8117010085508127
H1_DY_X = -0.37342068917706683
H1_DY_Y = -0.8276095303812099
H1_DY_Z = -0.4190697485106156
H1_DZ_X = 0.8921101165924483
H1_DZ_Y = -0.1965134124494341
H1_DZ_Z = -0.4068439732881046
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 432
H2_OUTID2_ORIG = 402
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 329.02460009027897
H2_P_Y = 134.09528152326476
H2_P_Z = 76.3362345962698
# Orientation:
H2_DX_X = -0.3457268592056266
H2_DX_Y = -0.9255802092452257
H2_DX_Z = -0.1541888941441698
H2_DY_X = -0.39210517408884016
H2_DY_Y = -0.006781005435271936
H2_DY_Z = 0.9198954018898178
H2_DZ_X = -0.852482534294154
H2_DZ_Y = 0.37849081127401973
H2_DZ_Z = -0.3605804133678845
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 3
H3_OUTID2 = 6
H3_INID2_ORIG = 479
H3_OUTID2_ORIG = 435
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 350.2180680891234
H3_P_Y = 118.75455749398412
H3_P_Z = 74.71629982140713
# Orientation:
H3_DX_X = 0.2878728353842348
H3_DX_Y = 0.95693613756373
H3_DX_Z = 0.037449422858813364
H3_DY_X = 0.32813404171810134
H3_DY_Y = -0.13529850527969245
H3_DY_Z = 0.93489163282959
H3_DZ_X = 0.8996984390969942
H3_DZ_Y = -0.2568414746370138
H3_DZ_Z = -0.352952086823052
## Properties of helix 4
H4_INID = 1
H4_OUTID = 10
H4_INID2 = 3
H4_OUTID2 = 8
H4_INID2_ORIG = 529
H4_OUTID2_ORIG = 484
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 329.4537938244124
H4_P_Y = 145.58747018084978
H4_P_Z = 56.70008639441388
# Orientation:
H4_DX_X = 0.5062193825208396
H4_DX_Y = -0.2169550226712147
H4_DX_Z = -0.8346690690914471
H4_DY_X = -0.8490139086808881
H4_DY_Y = -0.29526453603750724
H4_DY_Z = -0.4381714694329375
H4_DZ_X = -0.15138467434542235
H4_DZ_Y = 0.9304565394989197
H4_DZ_Z = -0.33366646291922564
## Properties of helix 5
H5_INID = 1
H5_OUTID = 7
H5_INID2 = 3
H5_OUTID2 = 5
H5_INID2_ORIG = 38
H5_OUTID2_ORIG = 531
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 344.4704211737616
H5_P_Y = 137.32456765319648
H5_P_Z = 46.48373626289186
# Orientation:
H5_DX_X = -0.8621102100744338
H5_DX_Y = 0.12556616461745307
H5_DX_Z = 0.4909166161260785
H5_DY_X = -0.002858466690156547
H5_DY_Y = 0.9675902959012603
H5_DY_Z = -0.252509105669219
H5_DZ_X = -0.5067127537901683
H5_DZ_Y = -0.2190939469290356
H5_DZ_Z = -0.8338105465664611
#############  END of Description of junction: j8