############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 19:62:73:99:111:172 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -44.06133480218218 H1_P_Y = 16.297016925694443 H1_P_Z = -53.08460499569936 # Orientation: H1_DX_X = -0.8299456086881634 H1_DX_Y = 0.33943948022845305 H1_DX_Z = -0.44268626122963894 H1_DY_X = 0.21648765496503586 H1_DY_Y = 0.9273544220720993 H1_DY_Z = 0.305199723314189 H1_DZ_X = 0.5141238973895028 H1_DZ_Y = 0.15746305955860862 H1_DZ_Z = -0.8431381873734978 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -28.698998433523375 H2_P_Y = -1.3649167029753393 H2_P_Z = -40.203935147515445 # Orientation: H2_DX_X = -0.003938359143447201 H2_DX_Y = 0.9693373519368661 H2_DX_Z = 0.2457022333379939 H2_DY_X = 0.9771958826693812 H2_DY_Y = -0.048433607447568416 H2_DY_Z = 0.20674233374813156 H2_DZ_X = 0.21230331184714757 H2_DZ_Y = 0.24091343634101636 H2_DZ_Z = -0.9470417202896044 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = -63.725727355383725 H3_P_Y = 16.411157721533012 H3_P_Z = -61.18847816996887 # Orientation: H3_DX_X = 0.783974207983853 H3_DX_Y = 0.37673636298697133 H3_DX_Z = 0.4934107356143045 H3_DY_X = 0.300789633475695 H3_DY_Y = 0.4647594544391147 H3_DY_Z = -0.8327810311858812 H3_DZ_X = -0.5430562011520124 H3_DZ_Y = 0.8012916836663173 H3_DZ_Z = 0.2510410326570991 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = -54.5644618579663 H4_P_Y = 3.8273577848557956 H4_P_Z = -67.17731486106378 # Orientation: H4_DX_X = -0.10925857574216735 H4_DX_Y = -0.5114069559169523 H4_DX_Z = 0.8523646455986693 H4_DY_X = -0.8470914685216613 H4_DY_Y = -0.40076276493801544 H4_DY_Z = -0.34903474067354523 H4_DZ_X = 0.5200948063426623 H4_DZ_Y = -0.7601658580066522 H4_DZ_Z = -0.389421700392262 ############# END of Description of junction: j3