#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS2HS2HS8HS2HS4
FINGERPRINT = 71:81:84:86:89:101:114:119:148:162
LOOP_LENGTH_SUM = 18
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  666
S1_NAME_ID3 = 673
S1_NUM_ID5_ORIG =  666
S1_NUM_ID3_ORIG = 673
S1_NAME2_ID5 =  668
S1_NAME2_ID3 = 671
S1_NUM2_ID5_ORIG =  668
S1_NUM2_ID3_ORIG = 671
S1_SQ2 = GGAC
S1_SQLEN2 = 4
S1_SQ = GUGGACCC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  582
S2_NAME_ID3 = 591
S2_NUM_ID5_ORIG =  582
S2_NUM_ID3_ORIG = 591
S2_NAME2_ID5 =  584
S2_NAME2_ID3 = 589
S2_NUM2_ID5_ORIG =  584
S2_NUM2_ID3_ORIG = 589
S2_SQ2 = CGACUC
S2_SQLEN2 = 6
S2_SQ = GGCGACUCAC
S2_SQLEN = 10
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  807
S3_NAME_ID3 = 814
S3_NUM_ID5_ORIG =  807
S3_NUM_ID3_ORIG = 814
S3_NAME2_ID5 =  809
S3_NAME2_ID3 = 812
S3_NUM2_ID5_ORIG =  809
S3_NUM2_ID3_ORIG = 812
S3_SQ2 = GUUC
S3_SQLEN2 = 4
S3_SQ = UGGUUCUC
S3_SQLEN = 8
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  1193
S4_NAME_ID3 = 1200
S4_NUM_ID5_ORIG =  1193
S4_NUM_ID3_ORIG = 1200
S4_NAME2_ID5 =  1195
S4_NAME2_ID3 = 1198
S4_NUM2_ID5_ORIG =  1195
S4_NUM2_ID3_ORIG = 1198
S4_SQ2 = GCGU
S4_SQLEN2 = 4
S4_SQ = GAGCGUUC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  1245
S5_NAME_ID3 = 1258
S5_NUM_ID5_ORIG =  1245
S5_NUM_ID3_ORIG = 1258
S5_NAME2_ID5 =  1247
S5_NAME2_ID3 = 1256
S5_NUM2_ID5_ORIG =  1247
S5_NUM2_ID3_ORIG = 1256
S5_SQ2 = AGUGCGAAUG
S5_SQLEN2 = 10
S5_SQ = GAAGUGCGAAUGCC
S5_SQLEN = 14
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 668
H1_OUTID2_ORIG = 589
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -89.74964335432023
H1_P_Y = -77.60119776536065
H1_P_Z = 53.84966634567599
# Orientation:
H1_DX_X = 0.4906134698023976
H1_DX_Y = 0.44583921345279975
H1_DX_Z = 0.7486827225175219
H1_DY_X = -0.6497777746998281
H1_DY_Y = 0.7596595357072289
H1_DY_Z = -0.026575050615250007
H1_DZ_X = -0.5805921690434559
H1_DZ_Y = -0.4734393156011123
H1_DZ_Z = 0.6623956126730945
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 809
H2_OUTID2_ORIG = 671
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -84.16909543505162
H2_P_Y = -66.65979677457358
H2_P_Z = 36.844011828353594
# Orientation:
H2_DX_X = 0.8683093656363354
H2_DX_Y = -0.4780208460290396
H2_DX_Z = -0.13241947103771423
H2_DY_X = 0.024661890144528797
H2_DY_Y = 0.3082370286491454
H2_DY_Z = -0.9509898660574976
H2_DZ_X = 0.49540956462580255
H2_DZ_Y = 0.822487692875228
H2_DZ_Z = 0.27943399640353306
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 3
H3_OUTID2 = 6
H3_INID2_ORIG = 1195
H3_OUTID2_ORIG = 812
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = -95.60916251634804
H3_P_Y = -90.86131179276124
H3_P_Z = 36.85812423505115
# Orientation:
H3_DX_X = 0.1911969820422854
H3_DX_Y = -0.922949176473935
H3_DX_Z = -0.3340786310197359
H3_DY_X = -0.7421184006309574
H3_DY_Y = -0.3586892772192982
H3_DY_Z = 0.5662175216759451
H3_DZ_X = -0.6424204180307953
H3_DZ_Y = 0.1396668180134526
H3_DZ_Z = -0.7535178740037551
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 3
H4_OUTID2 = 6
H4_INID2_ORIG = 1247
H4_OUTID2_ORIG = 1198
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = -76.04077836136554
H4_P_Y = -100.53023800239835
H4_P_Z = 51.71959906406107
# Orientation:
H4_DX_X = 0.6287891153320402
H4_DX_Y = 0.772353964751531
H4_DX_Z = -0.08996444615816301
H4_DY_X = -0.25580056870195733
H4_DY_Y = 0.3147235493317879
H4_DY_Z = 0.914065181782874
H4_DZ_X = 0.7342957969998878
H4_DZ_Y = -0.5517412805188684
H4_DZ_Z = 0.39546332558114017
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 584
H5_OUTID2_ORIG = 1256
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = -67.98248849305052
H5_P_Y = -82.24336487716671
H5_P_Z = 23.129942115987262
# Orientation:
H5_DX_X = 0.5500128603441397
H5_DX_Y = 0.4219590559868749
H5_DX_Z = 0.7207193687744997
H5_DY_X = 0.41753155215111803
H5_DY_Y = -0.8863168382096802
H5_DY_Z = 0.20027447481965055
H5_DZ_X = 0.7232933405018684
H5_DZ_Y = 0.1907695399603142
H5_DZ_Z = -0.6636668789452962
#############  END of Description of junction: j9