#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS11
FINGERPRINT = 88:89:131
LOOP_LENGTH_SUM = 16
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  623
S1_NAME_ID3 = 639
S1_NUM_ID5_ORIG =  623
S1_NUM_ID3_ORIG = 639
S1_NAME2_ID5 =  625
S1_NAME2_ID3 = 637
S1_NUM2_ID5_ORIG =  625
S1_NUM2_ID3_ORIG = 637
S1_SQ2 = GAAGGGAAACCGA
S1_SQLEN2 = 13
S1_SQ = CCGAAGGGAAACCGAGU
S1_SQLEN = 17
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  599
S2_NAME_ID3 = 605
S2_NUM_ID5_ORIG =  599
S2_NUM_ID3_ORIG = 605
S2_NAME2_ID5 =  601
S2_NAME2_ID3 = 603
S2_NUM2_ID5_ORIG =  601
S2_NUM2_ID3_ORIG = 603
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = AGCAAGG
S2_SQLEN = 7
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  649
S3_NAME_ID3 = 658
S3_NUM_ID5_ORIG =  649
S3_NUM_ID3_ORIG = 658
S3_NAME2_ID5 =  651
S3_NAME2_ID3 = 656
S3_NUM2_ID5_ORIG =  651
S3_NUM2_ID3_ORIG = 656
S3_SQ2 = GUUAAG
S3_SQLEN2 = 6
S3_SQ = GCGUUAAGUU
S3_SQLEN = 10
S3_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 625
H1_OUTID2_ORIG = 603
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 40.18696578707973
H1_P_Y = -84.86528911498255
H1_P_Z = 9.550799803077027
# Orientation:
H1_DX_X = 0.17283312733392364
H1_DX_Y = 0.18579723121484903
H1_DX_Z = -0.9672683696724906
H1_DY_X = -0.08515056482364969
H1_DY_Y = 0.9811888886752342
H1_DY_Z = 0.17325630161840166
H1_DZ_X = 0.9812635178208708
H1_DZ_Y = 0.05241901957464279
H1_DZ_Z = 0.18540268331564747
## Properties of helix 2
H2_INID = 1
H2_OUTID = 17
H2_INID2 = 3
H2_OUTID2 = 15
H2_INID2_ORIG = 651
H2_OUTID2_ORIG = 637
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 6.39462811672227
H2_P_Y = -89.82590535980155
H2_P_Z = -1.325767291898015
# Orientation:
H2_DX_X = 0.5515654368943981
H2_DX_Y = 0.290131518123971
H2_DX_Z = 0.7820481257662901
H2_DY_X = -0.2984571533480578
H2_DY_Y = 0.9441337757776012
H2_DY_Z = -0.1397667380005303
H2_DZ_X = -0.778908785698853
H2_DZ_Y = -0.15631735548882375
H2_DZ_Z = 0.6073433855193606
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 3
H3_OUTID2 = 8
H3_INID2_ORIG = 601
H3_OUTID2_ORIG = 656
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 39.8990383195288
H3_P_Y = -74.98924759537293
H3_P_Z = -6.5243812284312925
# Orientation:
H3_DX_X = 0.2709106543146689
H3_DX_Y = -0.19212464771386806
H3_DX_Z = 0.9432367343989654
H3_DY_X = 0.9602138341949171
H3_DY_Y = 0.12295286979751552
H3_DY_Z = -0.2507428651611976
H3_DZ_X = -0.06779977875692822
H3_DZ_Y = 0.9736378749562817
H3_DZ_Z = 0.21778998703137997
#############  END of Description of junction: j9