#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 134
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = CGAGC
S1_SQLEN2 = 5
S1_SQ = ACCGAGCCA
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  21
S2_NAME_ID3 = 27
S2_NUM_ID5_ORIG =  21
S2_NUM_ID3_ORIG = 27
S2_NAME2_ID5 =  23
S2_NAME2_ID3 = 25
S2_NUM2_ID5_ORIG =  23
S2_NUM2_ID3_ORIG = 25
S2_SQ2 = GGA
S2_SQLEN2 = 3
S2_SQ = UGGGAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 25
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -23.388941913450818
H1_P_Y = -4.8409874154727195
H1_P_Z = 2.1099141275685316
# Orientation:
H1_DX_X = 0.8926038193506223
H1_DX_Y = -0.3257092163286792
H1_DX_Z = -0.3117241217474853
H1_DY_X = 0.428665466624345
H1_DY_Y = 0.8273229388380594
H1_DY_Z = 0.36301883228847975
H1_DZ_X = 0.13965793713360952
H1_DZ_Y = -0.45765736230384846
H1_DZ_Z = 0.878091908244615
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 23
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -34.03910259504557
H2_P_Y = -3.9451823132522414
H2_P_Z = -18.75284847814843
# Orientation:
H2_DX_X = -0.35540622724128923
H2_DX_Y = -0.8223151399837128
H2_DX_Z = 0.4443919713402664
H2_DY_X = -0.7985105313436165
H2_DY_Y = 0.5142406863461089
H2_DY_Z = 0.3129495931290407
H2_DZ_X = -0.48586762083046864
H2_DZ_Y = -0.24362743494906125
H2_DZ_Z = -0.8393916415885272
#############  END of Description of junction: j1