#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 72:79:104:105:175:175
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 27
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 27
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CG
S1_SQLEN2 = 2
S1_SQ = ACGC
S1_SQLEN = 4
S1_CHAR = E
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUGG
S2_SQLEN2 = 4
S2_SQ = GGUGGU
S2_SQLEN = 6
S2_CHAR = E
## Properties of strand 3
S3_NAME_ID5 =  43
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  43
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = UGGUUA
S3_SQLEN2 = 6
S3_SQ = GUGGUUAC
S3_SQLEN = 8
S3_CHAR = E
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = UC
S4_SQLEN2 = 2
S4_SQ = GUCC
S4_SQLEN = 4
S4_CHAR = E
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = E
H1_OUTSEQ_CHAR = E
# Position:
H1_P_X = -10.361460248631351
H1_P_Y = 6.972194128455005
H1_P_Z = 56.085490416451904
# Orientation:
H1_DX_X = -0.5510860157320092
H1_DX_Y = 0.29570787101762175
H1_DX_Z = 0.7802954942089855
H1_DY_X = 0.8077817015572517
H1_DY_Y = 0.4235606320064891
H1_DY_Z = 0.40998184550480943
H1_DZ_X = -0.20926759398887285
H1_DZ_Y = 0.8562436837912957
H1_DZ_Z = -0.4722857483278773
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = E
H2_OUTSEQ_CHAR = E
# Position:
H2_P_X = -6.471808905731869
H2_P_Y = -4.038266431438364
H2_P_Z = 61.85795238012301
# Orientation:
H2_DX_X = -0.69316831490283
H2_DX_Y = 0.2359009267405483
H2_DX_Z = 0.6810788794095188
H2_DY_X = -0.6775101139877249
H2_DY_Y = -0.5357005746615942
H2_DY_Z = -0.5039890274118832
H2_DZ_X = 0.24596286845602133
H2_DZ_Y = -0.8107870540839857
H2_DZ_Z = 0.5311559283964513
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = E
H3_OUTSEQ_CHAR = E
# Position:
H3_P_X = -23.565130922108548
H3_P_Y = 18.89100077378243
H3_P_Z = 43.47829794825207
# Orientation:
H3_DX_X = -0.41776413285659686
H3_DX_Y = -0.8003308309923653
H3_DX_Z = 0.4300507996291216
H3_DY_X = -0.8251348492023887
H3_DY_Y = 0.136087434366992
H3_DY_Z = -0.548299818383299
H3_DZ_X = 0.3802967393106691
H3_DZ_Y = -0.5839098998736709
H3_DZ_Z = -0.7172333085539151
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = E
H4_OUTSEQ_CHAR = E
# Position:
H4_P_X = -28.445216381602087
H4_P_Y = 27.05468625863699
H4_P_Z = 51.41682929507744
# Orientation:
H4_DX_X = -0.3499669404124539
H4_DX_Y = -0.7796101794372063
H4_DX_Z = 0.5193564370798072
H4_DY_X = 0.8380816821688306
H4_DY_Y = -0.012888200250035453
H4_DY_Z = 0.5453925084811644
H4_DZ_X = -0.4184999816384831
H4_DZ_Y = 0.6261324639500785
H4_DZ_Z = 0.6578874546276055
#############  END of Description of junction: j1