#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS4
FINGERPRINT = 128
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  2
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = CCGATA
S1_SQLEN2 = 6
S1_SQ = TACCGATAAG
S1_SQLEN = 10
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 13
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 13
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 11
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 11
S2_SQ2 = TATCGG
S2_SQLEN2 = 6
S2_SQ = CTTATCGGTA
S2_SQLEN = 10
S2_CHAR = N
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 11
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = N
# Position:
H1_P_X = 59.839239874864134
H1_P_Y = -28.499663828840394
H1_P_Z = 94.50352595295394
# Orientation:
H1_DX_X = 0.5083183634801927
H1_DX_Y = -0.5637972882546904
H1_DX_Z = -0.6509570332252963
H1_DY_X = 0.661010821088098
H1_DY_Y = 0.7399424832218209
H1_DY_Z = -0.12469890106956427
H1_DZ_X = 0.5519756659067951
H1_DZ_Y = -0.36690290170586337
H1_DZ_Z = 0.7488024605772665
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = N
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 36.53119830576089
H2_P_Y = -32.22833853049321
H2_P_Z = 72.86694440231011
# Orientation:
H2_DX_X = 0.0202605293667375
H2_DX_Y = 0.9918961280255836
H2_DX_Z = 0.1254256040752324
H2_DY_X = 0.08303718281408123
H2_DY_Y = 0.12334849532871317
H2_DY_Z = -0.988883195817607
H2_DZ_X = -0.9963404725394227
H2_DZ_Y = 0.030450285844295877
H2_DZ_Z = -0.07986515430349073
#############  END of Description of junction: j1