#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS3HS3
FINGERPRINT = 122
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  3
S1_NAME_ID3 = 9
S1_NUM_ID5_ORIG =  3
S1_NUM_ID3_ORIG = 9
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CCGAT
S1_SQLEN2 = 5
S1_SQ = ACCGATA
S1_SQLEN = 7
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 11
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 11
S2_SQ2 = ATCGG
S2_SQLEN2 = 5
S2_SQ = TATCGGT
S2_SQLEN = 7
S2_CHAR = N
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 2
H1_OUTID2 = 6
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 11
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = N
# Position:
H1_P_X = 56.97681311044142
H1_P_Y = 13.963787359284344
H1_P_Z = 92.59710406454275
# Orientation:
H1_DX_X = 0.06859618036016712
H1_DX_Y = -0.9441135245403665
H1_DX_Z = -0.32240381018215203
H1_DY_X = 0.9029559953220598
H1_DY_Y = 0.19617190193928558
H1_DY_Z = -0.382344158320052
H1_DZ_X = 0.42422285953487915
H1_DZ_Y = -0.26488910447486624
H1_DZ_Z = 0.8659496104153845
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 2
H2_OUTID2 = 6
H2_INID2_ORIG = 7
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = N
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 40.922917870657464
H2_P_Y = 8.178652362360937
H2_P_Z = 73.89298737508237
# Orientation:
H2_DX_X = -0.06200537497014125
H2_DX_Y = 0.3601958167829977
H2_DX_Z = 0.9308137875251106
H2_DY_X = 0.12490800757623077
H2_DY_Y = 0.9280765858273536
H2_DY_Z = -0.35081596383628266
H2_DZ_X = -0.9902289246018583
H2_DZ_Y = 0.0945136202410719
H2_DZ_Z = -0.10253707851688887
#############  END of Description of junction: j1