############# Start of Description of junction: j6 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS3HS9HS5HS8 FINGERPRINT = 68:72:86:88:100:100:113:129:141:155 LOOP_LENGTH_SUM = 27 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 676 S1_NAME_ID3 = 686 S1_NUM_ID5_ORIG = 676 S1_NUM_ID3_ORIG = 686 S1_NAME2_ID5 = 678 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 678 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = GCUAGAC S1_SQLEN2 = 7 S1_SQ = GGGCUAGACUC S1_SQLEN = 11 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 591 S2_NAME_ID3 = 604 S2_NUM_ID5_ORIG = 591 S2_NUM_ID3_ORIG = 604 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 602 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 602 S2_SQ2 = CGACUUAGAC S2_SQLEN2 = 10 S2_SQ = GGCGACUUAGACCU S2_SQLEN = 14 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 820 S3_NAME_ID3 = 827 S3_NUM_ID5_ORIG = 820 S3_NUM_ID3_ORIG = 827 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = UAGUUCUC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1207 S4_NAME_ID3 = 1215 S4_NUM_ID5_ORIG = 1207 S4_NUM_ID3_ORIG = 1215 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1213 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1213 S4_SQ2 = GCGUU S4_SQLEN2 = 5 S4_SQ = GAGCGUUCA S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1257 S5_NAME_ID3 = 1271 S5_NUM_ID5_ORIG = 1257 S5_NUM_ID3_ORIG = 1271 S5_NAME2_ID5 = 1259 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1259 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AAGUGCGGAUG S5_SQLEN2 = 11 S5_SQ = UGAAGUGCGGAUGCC S5_SQLEN = 15 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 14 H1_INID2 = 3 H1_OUTID2 = 12 H1_INID2_ORIG = 678 H1_OUTID2_ORIG = 602 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 15.79910460081535 H1_P_Y = 136.5651902546711 H1_P_Z = 70.82809206654005 # Orientation: H1_DX_X = 0.8867065141603145 H1_DX_Y = 0.12317221707581893 H1_DX_Z = -0.44562334172064766 H1_DY_X = 0.1898256552581259 H1_DY_Y = -0.9758613947963397 H1_DY_Z = 0.10798499317955645 H1_DZ_X = -0.421565864784462 H1_DZ_Y = -0.18034173972429812 H1_DZ_Z = -0.8886839024994941 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 32.501119800222924 H2_P_Y = 133.54579704423284 H2_P_Z = 94.57577713864825 # Orientation: H2_DX_X = -0.7362768046902026 H2_DX_Y = -0.1287017056329205 H2_DX_Z = 0.6643284863998815 H2_DY_X = 0.6377295994968506 H2_DY_Y = -0.46025230585593135 H2_DY_Z = 0.6176315834539992 H2_DZ_X = 0.22626847946804673 H2_DZ_Y = 0.8784097483074049 H2_DZ_Z = 0.4209499842947366 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 20.56515573073901 H3_P_Y = 114.2729836125083 H3_P_Z = 80.48100719952082 # Orientation: H3_DX_X = -0.6065926598725149 H3_DX_Y = -0.7693714591014498 H3_DX_Z = 0.2002820583799121 H3_DY_X = -0.15747212640967945 H3_DY_Y = -0.13065605620248277 H3_DY_Z = -0.9788419302326758 H3_DZ_X = 0.7792611079688321 H3_DZ_Y = -0.6252971716693736 H3_DZ_Z = -0.04189955500331166 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1259 H4_OUTID2_ORIG = 1213 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = -5.672798371874542 H4_P_Y = 122.89475607268987 H4_P_Z = 86.06067017415396 # Orientation: H4_DX_X = 0.026545808605579424 H4_DX_Y = 0.9724346057074484 H4_DX_Z = 0.23165978862995473 H4_DY_X = -0.11858834620835168 H4_DY_Y = 0.233168420871948 H4_DY_Z = -0.9651783729713657 H4_DZ_X = -0.9925885976521416 H4_DZ_Y = -0.0018507108574539188 H4_DZ_Z = 0.12150905595994743 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 15 H5_INID2 = 3 H5_OUTID2 = 13 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 19.11141974034117 H5_P_Y = 119.3213809895351 H5_P_Z = 112.53620511915133 # Orientation: H5_DX_X = -0.2833231463269179 H5_DX_Y = 0.9544605274390108 H5_DX_Z = 0.09345103699935464 H5_DY_X = -0.9548774859735083 H5_DY_Y = -0.28980766611636 H5_DY_Z = 0.06496540187740152 H5_DZ_X = 0.08908973867013259 H5_DZ_Y = -0.07082808920927164 H5_DZ_Z = 0.9935020886956636 ############# END of Description of junction: j6