############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 3 LILLEY = HS3HS5HS6 FINGERPRINT = 40:140:144 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 864 S1_NAME_ID3 = 872 S1_NUM_ID5_ORIG = 864 S1_NUM_ID3_ORIG = 872 S1_NAME2_ID5 = 866 S1_NAME2_ID3 = 870 S1_NUM2_ID5_ORIG = 866 S1_NUM2_ID3_ORIG = 870 S1_SQ2 = UAGGG S1_SQLEN2 = 5 S1_SQ = UGUAGGGGU S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 772 S2_NAME_ID3 = 782 S2_NUM_ID5_ORIG = 772 S2_NUM_ID3_ORIG = 782 S2_NAME2_ID5 = 774 S2_NAME2_ID3 = 780 S2_NUM2_ID5_ORIG = 774 S2_NUM2_ID3_ORIG = 780 S2_SQ2 = CGAUCUA S2_SQLEN2 = 7 S2_SQ = GACGAUCUACG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 878 S3_NAME_ID3 = 889 S3_NUM_ID5_ORIG = 878 S3_NUM_ID3_ORIG = 889 S3_NAME2_ID5 = 880 S3_NAME2_ID3 = 887 S3_NUM2_ID5_ORIG = 880 S3_NUM2_ID3_ORIG = 887 S3_SQ2 = CCAUCGAG S3_SQLEN2 = 8 S3_SQ = GCCCAUCGAGUC S3_SQLEN = 12 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 866 H1_OUTID2_ORIG = 780 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 92.41287970758191 H1_P_Y = 148.47961021830764 H1_P_Z = 67.43953295069622 # Orientation: H1_DX_X = 0.6980044148724431 H1_DX_Y = -0.7121644892574466 H1_DX_Z = -0.07491046027931247 H1_DY_X = 0.17641024391087967 H1_DY_Y = 0.2723964300220416 H1_DY_Z = -0.9458750502865314 H1_DZ_X = 0.6940239640400563 H1_DZ_Y = 0.6470099884483318 H1_DZ_Z = 0.3157670220054598 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 880 H2_OUTID2_ORIG = 870 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 92.2168024416392 H2_P_Y = 128.64967260417072 H2_P_Z = 73.42165278017724 # Orientation: H2_DX_X = 0.12479591563494807 H2_DX_Y = 0.8132724555221102 H2_DX_Z = -0.5683431116234914 H2_DY_X = -0.20702275197400866 H2_DY_Y = 0.5815569082334378 H2_DY_Z = 0.7867230406255175 H2_DZ_X = 0.9703440418768707 H2_DZ_Y = 0.019480132827794705 H2_DZ_Z = 0.24094182870366865 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 774 H3_OUTID2_ORIG = 887 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 73.03674353052524 H3_P_Y = 126.57054480089448 H3_P_Z = 62.50737893653454 # Orientation: H3_DX_X = -0.3675005382407619 H3_DX_Y = 0.9296512045283833 H3_DX_Z = 0.026305746742742997 H3_DY_X = -0.2658458627165885 H3_DY_Y = -0.07790264356378884 H3_DY_Z = -0.9608627141284245 H3_DZ_X = -0.8912178923637128 H3_DZ_Y = -0.36011083855490256 H3_DZ_Z = 0.2757731899334246 ############# END of Description of junction: j13