############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 4 LILLEY = HS6HS12HS12HS16 FINGERPRINT = 9:76:77:80:85:138 LOOP_LENGTH_SUM = 46 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 446 S1_NAME_ID3 = 467 S1_NUM_ID5_ORIG = 446 S1_NUM_ID3_ORIG = 467 S1_NAME2_ID5 = 448 S1_NAME2_ID3 = 465 S1_NUM2_ID5_ORIG = 448 S1_NUM2_ID3_ORIG = 465 S1_SQ2 = GACCGAUAGUGAACAAGU S1_SQLEN2 = 18 S1_SQ = GAGACCGAUAGUGAACAAGUAG S1_SQLEN = 22 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 25 S2_NAME_ID3 = 36 S2_NUM_ID5_ORIG = 25 S2_NUM_ID3_ORIG = 36 S2_NAME2_ID5 = 27 S2_NAME2_ID3 = 34 S2_NUM2_ID5_ORIG = 27 S2_NUM2_ID3_ORIG = 34 S2_SQ2 = UGCUCGGC S2_SQLEN2 = 8 S2_SQ = AUUGCUCGGCUC S2_SQLEN = 12 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 474 S3_NAME_ID3 = 491 S3_NUM_ID5_ORIG = 474 S3_NUM_ID3_ORIG = 491 S3_NAME2_ID5 = 476 S3_NAME2_ID3 = 489 S3_NUM2_ID5_ORIG = 476 S3_NUM2_ID3_ORIG = 489 S3_SQ2 = AACGCUGCAAAGUA S3_SQLEN2 = 14 S3_SQ = CGAACGCUGCAAAGUACC S3_SQLEN = 18 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 501 S4_NAME_ID3 = 518 S4_NUM_ID5_ORIG = 501 S4_NUM_ID3_ORIG = 518 S4_NAME2_ID5 = 503 S4_NAME2_ID3 = 516 S4_NUM2_ID5_ORIG = 503 S4_NUM2_ID3_ORIG = 516 S4_SQ2 = GGCGAAAUAGAGCA S4_SQLEN2 = 14 S4_SQ = GAGGCGAAAUAGAGCAUG S4_SQLEN = 18 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 448 H1_OUTID2_ORIG = 34 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 45.83467846309467 H1_P_Y = 127.58116684216736 H1_P_Z = 37.373062838531915 # Orientation: H1_DX_X = -0.1780463347586121 H1_DX_Y = -0.9344632555778958 H1_DX_Z = 0.3083470879605841 H1_DY_X = -0.5783396968407573 H1_DY_Y = -0.15414802007009598 H1_DY_Z = -0.8011002327840302 H1_DZ_X = 0.7961298246750701 H1_DZ_Y = -0.3209623215943225 H1_DZ_Z = -0.512991705955983 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 476 H2_OUTID2_ORIG = 465 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 63.73040019990046 H2_P_Y = 144.2755743840236 H2_P_Z = 56.03554182706959 # Orientation: H2_DX_X = -0.6326119442960021 H2_DX_Y = 0.4466807775218342 H2_DX_Z = 0.6326755969108504 H2_DY_X = 0.2411203399541364 H2_DY_Y = -0.6627191877369967 H2_DY_Z = 0.7089881944472936 H2_DZ_X = 0.7359776556353097 H2_DZ_Y = 0.6010653551800544 H2_DZ_Z = 0.31154025294952703 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 18 H3_INID2 = 3 H3_OUTID2 = 16 H3_INID2_ORIG = 503 H3_OUTID2_ORIG = 489 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 25.646893599918528 H3_P_Y = 171.83996448828546 H3_P_Z = 66.39703864103193 # Orientation: H3_DX_X = -0.7064010686006235 H3_DX_Y = 0.6921774956557272 H3_DX_Z = -0.14794541151270835 H3_DY_X = -0.3432367785192376 H3_DY_Y = -0.1521885943955681 H3_DY_Z = 0.926837173190421 H3_DZ_X = 0.6190202291941915 H3_DZ_Y = 0.705499076004827 H3_DZ_Z = 0.345086959482245 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 18 H4_INID2 = 3 H4_OUTID2 = 16 H4_INID2_ORIG = 27 H4_OUTID2_ORIG = 516 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 28.461236721353774 H4_P_Y = 142.29434222401812 H4_P_Z = 69.39535647092352 # Orientation: H4_DX_X = -0.7454153296163568 H4_DX_Y = -0.6546373262222858 H4_DX_Z = -0.12572174628714095 H4_DY_X = 0.6082423201189542 H4_DY_Y = -0.7451227837276804 H4_DY_Z = 0.2735567896913125 H4_DZ_X = -0.27275862294205666 H4_DZ_Y = 0.1274441379054565 H4_DZ_Z = 0.9536040715749294 ############# END of Description of junction: j1